• momics: cloud-native storage and query infrastructure for multi-omics data
• hicstuff: lightweight library/pipeline to generate and handle Hi-C data
• metator: Metagenomic binning based on Hi-C data
• nf-metator: Scalable containerized processing of metagenomic data with metator in nextflow

Doc 📘	Bioconductor 🧬	Bioc builds ⚙️	Github 📦	Github checks 🧾	Lifecycle 🍃
Doc	tidyCoverage	Bioc release: Bioc devel:	tidyCoverage
Doc	plyinteractions	Bioc release: Bioc devel:	plyinteractions
Doc	OHCA	Bioc release Bioc devel	OHCA
Doc	BiocBook	Bioc release: Bioc devel:	BiocBook
Doc	HiCExperiment	Bioc release: Bioc devel:	HiCExperiment
Doc	HiContacts	Bioc release: Bioc devel:	HiContacts
Doc	HiCool	Bioc release: Bioc devel:	HiCool
Doc	HiContactsData	Bioc release: Bioc devel:	HiContactsData
Doc	DNAZooData	Bioc release: Bioc devel:	DNAZooData
Doc	fourDNData	Bioc release: Bioc devel:	fourDNData
Doc	VplotR	Bioc release: Bioc devel:	VplotR
Doc	periodicDNA	Bioc release: Bioc devel:	periodicDNA	-

• tinyMapper: Versatile pipeline to process a variety of genome-wide assays
• autobcl2fastq: Automatically fetch data from a remote sequencer directory, demultiplex fastq files, trim adaptors and run some preliminary QCs

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1. OHCAOHCAPublic

   Orchestrating Hi-C analysis with Bioconductor

   TeX 11 3

2. HiContactsHiContactsPublic

   Analyzing Hi-C data in R with HiCExperiment objects

   R 15 3

3. BiocBookBiocBookPublic

   R 7 1

4. plyinteractionsplyinteractionsPublic

   Forked fromtidyomics/plyinteractions

   R

5. tidyCoveragetidyCoveragePublic

   R 23

6. koszullab/metaTORkoszullab/metaTORPublic

   Metagenomic binning based on Hi-C data

   Python 28 9