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The term${\tt funkycells}$ comes fromfunctional data analysisofK functions+ for multiplexed images ofcells. This packageorganizes ways to analyze cell relationships based on their (empirical)K functions, or other such functions. The approach achieves effectiveanalysis for many different data constructions and accounts for issuessuch as overfitting. We encourage all feedback and improvements, whichcan be submitted through this github repo or the packagewebsite.

Please see the packagewebsite for anintroduction to${\tt funkycells}$, given in the vignettevignette("funkycells"). Additional vignettes are also present showingapplications and simulated performance. The website also contains thechange log, documenting changes for each version of the package.

The stable version of${\tt funkycells}$ can be found on CRAN. Installusing:

install.packages("funkycells")

You can also install the development version of${\tt funkycells}$ fromGitHub with:

devtools::install_github("jrvanderdoes/funkycells")

We are actively developing the package. So while new functionalityconsistently pops up in the development version, we regularly update theCRAN version with the stable additions.