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The Gene Ontology (GO) knowledgebase is the world’s largest source of information on the functions of genes.This knowledge is both human-readable and machine-readable, and is a foundation for computational analysis of large-scale molecular biology and genetics experiments in biomedical research.For more information, please see our website,http://geneontology.org/.

Overview of some of the key repositories in this organization:

  • geneontology.github.io - GO documentation
  • go-ontology - Source ontology files for the Gene Ontology.This is primarily for the developers of the GO and contains the source code for the GO ontology.To download ontology files, please use the Downloads menu on ourwebsite.
  • go-annotation - Issues about GO annotations (manual & automated)
  • go-site - Metadata, tools, and files associated with the Gene Ontology website
  • noctua - Graph-based modeling / editing tools for biology
  • helpdesk - A place for the GO community to ask for help or report issues.

Getting help

If you have general questions about GO, check ourFrequently Asked Questions.

If you have a specific question about GO, its data, usage, software, or services, pleasecreate a ticket in our discussion tracker.

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  1. helpdeskhelpdeskPublic

    The Gene Ontology Helpdesk

    16 6

  2. go-announcementsgo-announcementsPublic

    Announcements related to ontology changes that may impact groups using GO, such as obsoletions, merges, etc.

    14 1

  3. geneontology.github.iogeneontology.github.ioPublic

    Repository for storing GO documentation, directly available through the general GO site

    SCSS 7 10

  4. go-ontologygo-ontologyPublic

    Source ontology files for the Gene Ontology

    Makefile 228 40

  5. go-annotationgo-annotationPublic

    This repository hosts the tracker for issues pertaining to GO annotations.

    Python 38 10

  6. go-sitego-sitePublic

    A collection of metadata, tools, and files associated with the Gene Ontology public web presence.

    JavaScript 46 89

Repositories

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Showing 10 of 129 repositories
  • noctua-models Public

    This is the data repository for the models created and edited with the Noctua tool stack for GO.

    geneontology/noctua-models’s past year of commit activity
    Makefile 11CC-BY-4.0 3 34(1 issue needs help) 2 UpdatedMar 17, 2025
  • go-fastapi Public
    geneontology/go-fastapi’s past year of commit activity
    Python 6 3 9 3 UpdatedMar 17, 2025
  • go-ontology Public

    Source ontology files for the Gene Ontology

    geneontology/go-ontology’s past year of commit activity
    Makefile 228CC-BY-4.0 40 695 51 UpdatedMar 17, 2025
  • go-annotation Public

    This repository hosts the tracker for issues pertaining to GO annotations.

    geneontology/go-annotation’s past year of commit activity
    Python 38BSD-3-Clause 10 444 2 UpdatedMar 17, 2025
  • annotation-query Public

    This is a repository for doing the queries like go-annotation, but with nobody following it

    geneontology/annotation-query’s past year of commit activity
    Python0BSD-3-Clause0 6 0 UpdatedMar 17, 2025
  • gocam-py Public

    Draft data model for GO-CAMs

    geneontology/gocam-py’s past year of commit activity
    Python0BSD-3-Clause0 4 2 UpdatedMar 17, 2025
  • go-site Public

    A collection of metadata, tools, and files associated with the Gene Ontology public web presence.

    geneontology/go-site’s past year of commit activity
    JavaScript 46BSD-3-Clause 89 239 46 UpdatedMar 14, 2025
  • neo Public

    noctua entity ontology

    geneontology/neo’s past year of commit activity
    Perl 9 2 31(1 issue needs help) 4 UpdatedMar 12, 2025
  • amigo Public

    AmiGO is the public interface for the Gene Ontology.

    geneontology/amigo’s past year of commit activity
    JavaScript 30BSD-3-Clause 17 173 25 UpdatedMar 11, 2025
  • minerva Public
    geneontology/minerva’s past year of commit activity
    Java 6BSD-3-Clause 9 61 9 UpdatedMar 11, 2025

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