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Identify putative introns in RNA-Seq alignments
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diekhans/intronProspector
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Identify putative introns in RNA-Seq alignments in BAM/SAM alignments.This works with both short and long-read RNA sequencing.
intronProspector- calls introns from SAM/BAM filesintronProspectorMerge- merges output from multipleintronProspectorruns or convert between formats
Usage is described in theintronProspector manual pageandintronProspectorMerge manual page
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Identify putative introns in RNA-Seq alignments
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