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1. singleCellHaystack-pysingleCellHaystack-pyPublic

   Finding surprising needles (=features) in haystacks (=single cell/spatial genomics data).

   Python 13 1

2. alexisvdb/singleCellHaystackalexisvdb/singleCellHaystackPublic

   Finding surprising needles (=genes) in haystacks (=single cell transcriptome data).

   R 86 9

3. MartinLoza/CanekMartinLoza/CanekPublic

   Unbiased integration of single cell transcriptomes.

   R 5 1

4. scmiscscmiscPublic

   Miscellaneous tools for single cell analysis

   R 2

5. scmisc-pyscmisc-pyPublic

   Miscellaneous tools for the analysis of single cell genomics data.

   Python