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Working with relational data models in R
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Are you using multiple data frames or database tables in R? Organizethem with dm.
- Use it for data analysis today.
- Build data models tomorrow.
- Deploy the data models to your organization’s Relational DatabaseManagement System (RDBMS) the day after.
dm bridges the gap in the data pipeline between individual data framesand relational databases. It’s a grammar of joined tables that providesa consistent set of verbs for consuming, creating, and deployingrelational data models. For individual researchers, it broadens thescope of datasets they can work with and how they work with them. Fororganizations, it enables teams to quickly and efficiently create andshare large, complex datasets.
dm objects encapsulate relational data models constructed from localdata frames or lazy tables connected to an RDBMS. dm objects support thefull suite of dplyr data manipulation verbs along with additionalmethods for constructing and verifying relational data models, includingkey selection, key creation, and rigorous constraint checking. Once adata model is complete, dm provides methods for deploying it to anRDBMS. This allows it to scale from datasets that fit in memory todatabases with billions of rows.
dm makes it easy to bring an existing relational data model into your Rsession. As the dm object behaves like a named list of tables itrequires little change to incorporate it within existing workflows. Thedm interface and behavior is modeled after dplyr, so you may already befamiliar with many of its verbs. dm also offers:
- visualization to help you understand relationships between entitiesrepresented by the tables
- simpler joins that “know” how tables are related, including a“flatten” operation that automatically follows keys and performscolumn name disambiguation
- consistency and constraint checks to help you understand (and fix) thelimitations of your data
That’s just the tip of the iceberg. SeeGettingstarted to hit the groundrunning and explore all the features.
The latest stable version of the {dm} package can be obtained fromCRAN with the command
install.packages("dm")The latest development version of {dm} can be installed from R-universe:
# Enable repository from cynkraoptions(repos= c(cynkra="https://cynkra.r-universe.dev",CRAN="https://cloud.r-project.org" ))# Download and install dm in Rinstall.packages('dm')
or from GitHub:
# install.packages("devtools")devtools::install_github("cynkra/dm")
Create a dm object (seeGettingstarted for details).
library(dm)dm<- dm_nycflights13(table_description=TRUE)dm#> ── Metadata ────────────────────────────────────────────────────────────────────#> Tables: `airlines`, `airports`, `flights`, `planes`, `weather`#> Columns: 53#> Primary keys: 4#> Foreign keys: 4
dm is a named list of tables:
names(dm)#> [1] "airlines" "airports" "flights" "planes" "weather"nrow(dm$airports)#> [1] 86dm$flights %>% count(origin)#> # A tibble: 3 × 2#> origin n#> <chr> <int>#> 1 EWR 641#> 2 JFK 602#> 3 LGA 518
Visualize relationships at any time:
dm %>% dm_draw()
Simple joins:
dm %>% dm_flatten_to_tbl(flights)#> Renaming ambiguous columns: %>%#> dm_rename(flights, year.flights = year) %>%#> dm_rename(flights, month.flights = month) %>%#> dm_rename(flights, day.flights = day) %>%#> dm_rename(flights, hour.flights = hour) %>%#> dm_rename(airlines, name.airlines = name) %>%#> dm_rename(airports, name.airports = name) %>%#> dm_rename(planes, year.planes = year) %>%#> dm_rename(weather, year.weather = year) %>%#> dm_rename(weather, month.weather = month) %>%#> dm_rename(weather, day.weather = day) %>%#> dm_rename(weather, hour.weather = hour)#> # A tibble: 1,761 × 48#> year.flights month.…¹ day.f…² dep_t…³ sched…⁴ dep_d…⁵ arr_t…⁶ sched…⁷ arr_d…⁸#> <int> <int> <int> <int> <int> <dbl> <int> <int> <dbl>#> 1 2013 1 10 3 2359 4 426 437 -11#> 2 2013 1 10 16 2359 17 447 444 3#> 3 2013 1 10 450 500 -10 634 648 -14#> 4 2013 1 10 520 525 -5 813 820 -7#> 5 2013 1 10 530 530 0 824 829 -5#> 6 2013 1 10 531 540 -9 832 850 -18#> 7 2013 1 10 535 540 -5 1015 1017 -2#> 8 2013 1 10 546 600 -14 645 709 -24#> 9 2013 1 10 549 600 -11 652 724 -32#> 10 2013 1 10 550 600 -10 649 703 -14#> # ℹ 1,751 more rows#> # ℹ abbreviated names: ¹month.flights, ²day.flights, ³dep_time,#> # ⁴sched_dep_time, ⁵dep_delay, ⁶arr_time, ⁷sched_arr_time, ⁸arr_delay#> # ℹ 39 more variables: carrier <chr>, flight <int>, tailnum <chr>,#> # origin <chr>, dest <chr>, air_time <dbl>, distance <dbl>,#> # hour.flights <dbl>, minute <dbl>, time_hour <dttm>, name.airlines <chr>,#> # name.airports <chr>, lat <dbl>, lon <dbl>, alt <dbl>, tz <dbl>, dst <chr>,#> # tzone <chr>, year.planes <int>, type <chr>, manufacturer <chr>,#> # model <chr>, engines <int>, seats <int>, speed <int>, engine <chr>,#> # year.weather <int>, month.weather <int>, day.weather <int>,#> # hour.weather <int>, temp <dbl>, dewp <dbl>, humid <dbl>, wind_dir <dbl>,#> # wind_speed <dbl>, wind_gust <dbl>, precip <dbl>, pressure <dbl>, …
Check consistency:
dm %>% dm_examine_constraints()#> ! Unsatisfied constraints:#> • Table `flights`: foreign key `tailnum` into table `planes`: values of `flights$tailnum` not in `planes$tailnum`: N725MQ (6), N537MQ (5), N722MQ (5), N730MQ (5), N736MQ (5), …
Learn more in theGettingstarted article.
If you encounter a clear bug, please file an issue with a minimalreproducible example onGitHub.For questions and other discussion, please usecommunity.rstudio.com.
License: MIT © cynkra GmbH.
Funded by:
Please note that the ‘dm’ project is released with aContributor Codeof Conduct. By contributingto this project, you agree to abide by its terms.
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