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Sleep stage detection using ECG

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cbrnr/sleepecg

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SleepECG

SleepECG provides tools for sleep stage classification whenEEG signals are not available. Based only onECG, SleepECG provides functions for

  • downloading and reading open polysomnography datasets,
  • detecting heartbeats from ECG signals, and
  • classifying sleep stages (which includes preprocessing, feature extraction, and classification).

Documentation

Documentation for SleepECG is available onRead the Docs. Check out thechangelog to learn what we added, changed, or fixed.

Installation

SleepECG is available on PyPI and can be installed withpip:

pip install sleepecg

SleepECG with all optional dependencies can be installed with the following command:

pip install "sleepecg[full]"

If you want the latest development version, use the following command:

pip install git+https://github.com/cbrnr/sleepecg

Example

The following example detects heartbeats in a short ECG (a one-dimensional NumPy array):

importnumpyasnpfromsleepecgimportdetect_heartbeats,get_toy_ecgecg,fs=get_toy_ecg()# 5 min of ECG data at 360 Hzbeats=detect_heartbeats(ecg,fs)# indices of detected heartbeats

Contributing

Thecontributing guide contains detailed instructions on how to contribute to SleepECG.


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