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1. echtvarechtvarPublic

   using all the bits for echt rapid variant annotation and filtering

   Rust 148 10

2. mosdepthmosdepthPublic

   fast BAM/CRAM depth calculation for WGS, exome, or targeted sequencing

   Nim 728 100

3. slivarslivarPublic

   genetic variant expressions, annotation, and filtering for great good.

   Nim 255 23

4. somaliersomalierPublic

   fast sample-swap and relatedness checks on BAMs/CRAMs/VCFs/GVCFs... "like damn that is one smart wine guy"

   Nim 276 40

5. vcfannovcfannoPublic

   annotate a VCF with other VCFs/BEDs/tabixed files

   Go 371 56

6. cyvcf2cyvcf2Public

   cython + htslib == fast VCF and BCF processing

   Cython 392 72