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Hugo Gene Nomenclature Consortium (HGNC) to BEL
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bio2bel/hgnc
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This package creates:
- HGNC BEL namespace
- HGNC gene families BEL namespace,
- HGNC gene family membership BEL Script
- orthology BEL script
bio2bel_hgnc
can be installed easily fromPyPI with thefollowing code in your favorite terminal:
$ pip install bio2bel_hgnc
or from the latest code onGitHub with:
$ python3 -m pip install git+https://github.com/bio2bel/hgnc.git
HGNC can be downloaded and populated from either the Python REPL or the automatically installed command lineutility.
>>>importbio2bel_hgnc>>>hgnc_manager=bio2bel_hgnc.Manager()>>>hgnc_manager.populate()
bio2bel_hgnc populate
- Gray KA,et al.genenames.org: the HGNC resources in 2015. NucleicAcids Res. 2015 Jan;43(Database issue):D1079-85
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Hugo Gene Nomenclature Consortium (HGNC) to BEL
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