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1. UKBiobank_Related_Pairs_Case_SelectionUKBiobank_Related_Pairs_Case_SelectionPublic

   Forked fromsic128/UKBiobank_Related_Pairs_Case_Selection

   Given a phenotype list of individuals in UKBB, this script generates an unrelated subset that maximizes case individuals, based on a designated pihat value.

   Python

2. jupyter_setupjupyter_setupPublic

   Tutorial to set up Jupyter Notebook on Narrows compute cluster

   Batchfile

3. kdpskdpsPublic

   Remove related subjects based on kinship matrix as well as subject phenotype

   R

4. gwas2gtcagwas2gtcaPublic

   Converting GWAS summary statistics to GCTA COJO analysis input file

   R 2

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