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Energy-based neuronal models (eLIF and mAdExp)

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Silmathoron/elif-madexp

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This repository contains implementations of the eLIF and mAdExp modelsfor BRIAN, NEST, and NEURON.

Installing the models

BRIAN

Just install the BRIAN simulator via pip:

pip install --user brian2

NEST

  • Install NEST (seehere)
  • Install NESTML usingpip install nestml (this code requires NESTML >= 4).
  • Then runpython nestml/nestml_install.py to install the models.
  • See theFAQ if you encouter any issue.

NEURON

  • Download and install NEURON (seehere)
  • Compile the models vianrnivmodl elif.mod andnrnivmodl madexp.mod

Running the models

Once the installation of one of the simulators is done, you can run thecorresponding files:

  • elif_brian_impl.py ormadexp_brian_impl.py for BRIAN
  • elif_nest_impl.py ormadexp_nest_impl.py for NEST
  • elif_neuron_impl.py ormadexp_neuron_impl.py for NEURON

To do this, you can call them with python using e.g.python elif_brian_impl.py.

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