Science For Life Laboratory

Science for Life Laboratory (SciLifeLab) is a national center for molecular biosciences with focus on health and environmental research

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genologicsgenologicsPublic
Forked frompekrau/genologics
Python interface to the GenoLogics LIMS server via its REST API.
Python 29 43
NouGATNouGATPublic
Forked fromvezzi/NouGAT
NouGAT is a pipeline that automates de novo assembly project tasks, generating a first draft assembly.
Python 5 6
TIDDITTIDDITPublic
TIDDIT - structural variant calling
Cython 74 15
coursescoursesPublic
Forked fromhenrythemes/jekyll-bootstrap-theme
Course homepages for some of the courses given at SciLifeLab
HTML 21 34

Repositories

Showing 10 of 46 repositories

TIDDIT Public
TIDDIT - structural variant calling
SciLifeLab/TIDDIT’s past year of commit activity
Cython 74 15 6 0 UpdatedMar 13, 2025
umi-transfer Public
A Rust software to extract Unique Molecular Identifiers in FastQ files and embedd them into the ID of the corresponding reads.
SciLifeLab/umi-transfer’s past year of commit activity
Rust 5MIT 2 1 1 UpdatedNov 9, 2024
genologics Public Forked frompekrau/genologics
Python interface to the GenoLogics LIMS server via its REST API.
SciLifeLab/genologics’s past year of commit activity
Python 29MIT 53 9 0 UpdatedAug 26, 2024
facs Public
Fast and Accurate Classification of Sequences using Bloom filters
SciLifeLab/facs’s past year of commit activity
Jupyter Notebook 16 9 8 0 UpdatedApr 19, 2023
OrderPortal Public Forked fromScilifelabDataCentre/OrderPortal
A portal for orders (a.k.a. requests, project applications) to a SciLifeLab facility from its users.
SciLifeLab/OrderPortal’s past year of commit activity
Python 1MIT 13 0 0 UpdatedOct 18, 2022
standalone_scripts-1 Public archive Forked fromNationalGenomicsInfrastructure/standalone_scripts
Repository to store standalone scripts that do not belong to any bigger package or repository
SciLifeLab/standalone_scripts-1’s past year of commit activity
Python0MIT 22 0 0 UpdatedJun 20, 2022
percolator Public Forked frompercolator/percolator
Semi-supervised learning for peptide identification from shotgun proteomics datasets
SciLifeLab/percolator’s past year of commit activity
C++0 39 0 0 UpdatedJan 5, 2021
coronastatus Public Forked fromBustByte/coronastatus
Open source webapp that let people report their health status to get overview of COVID-19 🇳🇴🇳🇱🇸🇰🇲🇽🇮🇹🇮🇳🇵🇭🇸🇪🇩🇰🇹🇷🇧🇪
SciLifeLab/coronastatus’s past year of commit activity
HTML0MIT 91 1 0 UpdatedMar 28, 2020
scilifelab Public archive Forked fromb97pla/scilifelab
Misc code snippets for Science For Life Laboratory
SciLifeLab/scilifelab’s past year of commit activity
Python 5MIT 25 10 0 UpdatedJan 30, 2020
Sarek Public archive Forked fromnf-core/sarek
Detect germline or somatic variants from normal or tumour/normal whole-genome or targeted sequencing
SciLifeLab/Sarek’s past year of commit activity
Nextflow 133MIT 436 0 0 UpdatedJan 27, 2020