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@SciCrunch

FDI Laboratory

FAIR Data Informatics Laboratory at the University of California, San Diego developing the SciCrunch.org infrastructure

Popular repositoriesLoading

  1. NIF-OntologyNIF-OntologyPublic

    NIF Standard Ontologies (NIFSTD)

    54 17

  2. scibotscibotPublic

    curation workflow automation and coordination

    Python 41 12

  3. sparc-curationsparc-curationPublic

    code and files for SPARC curation workflows

    Python 14 12

  4. bio-answerfinderbio-answerfinderPublic

    A question answering system for biomedical literature

    Java 9

  5. Antibody-WatchAntibody-WatchPublic

    Antibody Watch: Text Mining Antibody Specificity from the Literature

    Jupyter Notebook 7 1

  6. bio_electrabio_electraPublic

    Bio-Electra - Small and efficient discriminatively pre-trained language representation models for biomedical text mining

    Python 4 1

Repositories

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Showing 10 of 30 repositories
  • sparc-curation Public

    code and files for SPARC curation workflows

    SciCrunch/sparc-curation’s past year of commit activity
    Python 14MIT 12 50 1 UpdatedMar 20, 2025
  • Foundry-Docs Public

    Gitbook repository for Foundry ecosystem documentation

    SciCrunch/Foundry-Docs’s past year of commit activity
    00 1 0 UpdatedMar 19, 2025
  • SciCrunch/sckan-query-examples’s past year of commit activity
    Jupyter Notebook00 1 0 UpdatedMar 9, 2025
  • quantitative-db Public

    A flexible database for storing arbitrary quantitative measurements

    SciCrunch/quantitative-db’s past year of commit activity
    Python0MIT0 4 0 UpdatedFeb 24, 2025
  • NIF-Ontology Public

    NIF Standard Ontologies (NIFSTD)

    SciCrunch/NIF-Ontology’s past year of commit activity
    54CC-BY-4.0 17 148 4 UpdatedFeb 18, 2025
  • scibot Public

    curation workflow automation and coordination

    SciCrunch/scibot’s past year of commit activity
    Python 41Apache-2.0 12 23 1 UpdatedJan 31, 2025
  • API-Handbook-Docs Public

    Repository for API Handbook Gitbook

    SciCrunch/API-Handbook-Docs’s past year of commit activity
    00 0 0 UpdatedJan 16, 2025
  • SPARC-Citations Public

    Scripts to aggregate SPARC Citation information

    SciCrunch/SPARC-Citations’s past year of commit activity
    Python00 4 0 UpdatedJan 14, 2025
  • SciGraph Public Forked fromSciGraph/SciGraph

    A Neo4j backed ontology store

    SciCrunch/SciGraph’s past year of commit activity
    Java0Apache-2.0 49 0 1 UpdatedDec 19, 2024
  • SciCrunch/key_resource_table_extractor’s past year of commit activity
    Python 10 0 0 UpdatedOct 12, 2024

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