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Cluster algorithms from mothur in R
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SchlossLab/clustur
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clustur was developed for two main reasons: to allow developers toeasily create pipelines with mothur code in R, and to give users apowerful clustering algorithm from mothur without having to download it.Because clustur is built using rcpp, it benefits from the speed of C++and the usability of R. Additionally, since clustur will be open source,developers can modify are package as needed. This will not only help uscontinue to create high quality packages, but will allow everyone totake advantage of the foundation that is already built.
For the official release from CRAN you can use the standardinstall.packages() function:
# install via craninstall.packages("clustur")library(clustur)
For the developmental version, you can use theinstall_github()function from the {devtools} package
# install via githubdevtools::install_github("SchlossLab/clustur")library(clustur)
To get started, look at the“Getstarted”page.
For feature request please visit the issue page in GitHub and use thefeature tag. If you would like to contribute pull request are welcomed!
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Cluster algorithms from mothur in R
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