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High-level functions for parallel programming with Rcpp
RcppCore/RcppParallel
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High level functions for parallel programming with Rcpp. TheparallelFor() function can be used to convert the work of a standard serial "for" loop into a parallel one, and theparallelReduce() function can be used for accumulating aggregate or other values.
The high level interface enables safe and robust parallel programming without direct manipulation of operating system threads. On Windows, macOS, and Linux systems, the underlying implementation is based onIntel TBB (Threading Building Blocks). On other platforms, a less-performant fallback implementation based on theTinyThread library is used.
For additional documentation on using RcppParallel see the package website athttp://rcppcore.github.io/RcppParallel/.
RcppParallel supports the new interface of Intel TBB, and can be configured to use an external copy of TBB (e.g., withoneTBB or the system TBB library), using theTBB_LIB andTBB_INC environment variables.
To build the development version ofRcppParallel withoneTBB:
- Install
oneTBB.
For example, installingoneTBB on Linux 64-bit (x86_64) to$HOME directory (change if needed!):
TBB_RELEASE="https://api.github.com/repos/oneapi-src/oneTBB/releases/latest"TBB_TAG=$(curl --silent$TBB_RELEASE| grep -Po'"tag_name": "\K.*?(?=")')TBB_VERSION=${TBB_TAG#?}wget https://github.com/oneapi-src/oneTBB/releases/download/v$TBB_VERSION/oneapi-tbb-$TBB_VERSION-lin.tgztar zxvf oneapi-tbb-$TBB_VERSION-lin.tgz -C$HOMEexport TBB="$HOME/oneapi-tbb-$TBB_VERSION"
Note that you may replaceTBB_VERSION=${TBB_TAG#?} with a custom version number if needed ( check available releaseshere ).
- Set the TBB environment variables (specifically:
TBBfor the installation prefix,TBB_INCfor the directory that includes the header files, andTBB_LIBfor the libraries directory).
For example, installingoneTBB on Linux 64-bit (x86_64) to$HOME directory (change if needed!):
source$TBB/env/vars.sh intel64export TBB_INC="$TBB/include"export TBB_LIB="$TBB/lib/intel64/gcc4.8"
- Build the development version of
RcppParallel:
install.packages("remotes")remotes::install_github("RcppCore/RcppParallel")
The RcppParallel package is made available under theGPLv2 license.
TheTinyThread library is licensed under thezlib/libpng license.
The Intel TBB Library is licensed under the Apache 2.0 license, as described athttps://github.com/oneapi-src/oneTBB/blob/master/LICENSE.txt.
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