Human Cell Atlas

An open international collaboration to create comprehensive reference maps of all human cells

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metadata-schemametadata-schemaPublic
This repo is for the metadata schemas associated with the HCA
Python 67 32
dcp2dcp2Public
Shared artifacts concerning the Human Cell Atlas (HCA) Data Coordination Platform (DCP)
4 2

Repositories

Showing 10 of 121 repositories

skylab Public
Soon to be deprecated in favor of broadinstitute/warp github repo. Previously: Secondary analysis pipelines
HumanCellAtlas/skylab’s past year of commit activity
WDL 48BSD-3-Clause 34 1 19 UpdatedMar 13, 2025
data-store Public
Design specs and prototypes for the HCA Data Storage System (DSS, "blue box")
HumanCellAtlas/data-store’s past year of commit activity
Python 41 5 212 88 UpdatedMar 13, 2025
metadata-schema Public
This repo is for the metadata schemas associated with the HCA
HumanCellAtlas/metadata-schema’s past year of commit activity
Python 67Apache-2.0 32 85 (3 issues need help) 53 UpdatedMar 12, 2025
matrix-service Public
DCP Expression Matrix Service
HumanCellAtlas/matrix-service’s past year of commit activity
Python 12MIT 4 31 298 UpdatedMar 12, 2025
data-consumer-vignettes Public
Simple walk-throughs of interacting with the DCP as a downstream data consumer.
HumanCellAtlas/data-consumer-vignettes’s past year of commit activity
Jupyter Notebook 17MIT 5 25 91 UpdatedMar 12, 2025
fusillade Public
Federated User Identity Login & Access Decision Engine
HumanCellAtlas/fusillade’s past year of commit activity
Python 8 1 33 66 UpdatedMar 11, 2025
secondary-analysis Public
Secondary Analysis Service of the Human Cell Atlas Data Coordination Platform
HumanCellAtlas/secondary-analysis’s past year of commit activity
Python 3BSD-3-Clause 2 124 127 UpdatedMar 11, 2025
data-monitoring-dashboard Public
HumanCellAtlas/data-monitoring-dashboard’s past year of commit activity
Python 2 1 9 57 UpdatedMar 7, 2025
query-service Public
Prototype implementation of the DCP Query Service, a metadata search engine for HCA
HumanCellAtlas/query-service’s past year of commit activity
Python 7MIT 2 48 74 UpdatedMar 7, 2025
dcp2 Public
Shared artifacts concerning the Human Cell Atlas (HCA) Data Coordination Platform (DCP)
HumanCellAtlas/dcp2’s past year of commit activity
4 2 19 0 UpdatedFeb 26, 2025