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@Hekstra-Lab

Hekstra Lab

GitHub of the Hekstra Lab. Note: Careless and Reciprocal Spaceship have migrated to https://github.com/rs-station

Popular repositoriesLoading

  1. phase-retrievalphase-retrievalPublic

    A small library implementing phase retrieval algorithms for 2D images.

    Jupyter Notebook 27 10

  2. SFcalculatorSFcalculatorPublic

    20 1

  3. colavcolavPublic

    Calculate protein structural representations (dihedral angles, CA pairwise distances, and strain analysis) for downstream analysis (e.g., PCA, t-SNE, or UMAP).

    Jupyter Notebook 9 1

  4. SFcalculator_torchSFcalculator_torchPublic

    Differentiable pipeline connecting protein atomic models and scattering observables, both crystallography and cryoEM

    Python 7 4

  5. mdtoolsmdtoolsPublic

    Tools for running MD simulations in OpenMM

    Python 6 3

  6. scientific-python-bootcampscientific-python-bootcampPublic

    Notebooks from a three day introduction to scientific computing in python at Harvard University.

    Jupyter Notebook 3 3

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