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cg Public
Glue between Clinical Genomics apps
Clinical-Genomics/cg’s past year of commit activity
Python 11 3 121 39 UpdatedFeb 20, 2026
parabellum Public
Paraphase JSON parser
Clinical-Genomics/parabellum’s past year of commit activity
Python00 1 1 UpdatedFeb 20, 2026
oncorefiner Public
Repo for secondary layer of WGS cancer analyses
Clinical-Genomics/oncorefiner’s past year of commit activity
Nextflow0MIT0 5 2 UpdatedFeb 20, 2026
scout Public
VCF visualization interface
Clinical-Genomics/scout’s past year of commit activity
HTML 177BSD-3-Clause 51 224 (4 issues need help) 8 UpdatedFeb 20, 2026
BALSAMIC Public
Bioinformatic Analysis pipeLine for SomAtic Mutations In Cancer
Clinical-Genomics/BALSAMIC’s past year of commit activity
Python 58MIT 15 82 10 UpdatedFeb 19, 2026
taxprofiler_metaval_cascade Public
Chaining wrapper between taxprofiler and metaval
Clinical-Genomics/taxprofiler_metaval_cascade’s past year of commit activity
00 0 1 UpdatedFeb 18, 2026
reference-files Public
Small reference files
Clinical-Genomics/reference-files’s past year of commit activity
Lua 5 2 9 1 UpdatedFeb 16, 2026
gens Public Forked fromSMD-Bioinformatics-Lund/gens
Clinical-Genomics/gens’s past year of commit activity
JavaScript 1MPL-2.0 9 9 1 UpdatedFeb 16, 2026
microSALT Public
Microbial Sequence Analysis and Loci-based Typing pipeline for use on NGS WGS data.
Clinical-Genomics/microSALT’s past year of commit activity
Python 3GPL-3.0 3 17 1 UpdatedFeb 16, 2026
mutacc-auto Public
Scripts to run mutacc import functionality automatically
Clinical-Genomics/mutacc-auto’s past year of commit activity
Python00 0 0 UpdatedFeb 10, 2026