A repository of XSL transform sheets to map CZI metadata to OME.

Image Reading, Metadata Conversion, and Image Writing for Microscopy Images in Python

Utility functions commonly used by AICS projects for interacting with Dask

[ECCV 2022] Official PyTorch implementation of the paper - Graph Neural Network for Cell Tracking in Microscopy Videos

Cross modal analysis of RNA seq and images

Normal mode analysis worflow

Uses the pytorch docker image to build an extended image with jupyter notebook, and some other python utils

A cookiecutter template to generate a new Python package.

Monitor nvidia gpu unit load associated with docker spawned processes

People commonly work with tabular datasets, people want to share their data, this makes that easier through Quilt3.