- Notifications
You must be signed in to change notification settings - Fork39
Data Analysis with Bootstrap Estimation in R
License
ACCLAB/dabestr
Folders and files
| Name | Name | Last commit message | Last commit date | |
|---|---|---|---|---|
Repository files navigation
dabestr is a package forDataAnalysis usingBootstrap-CoupledESTimation.
Estimationstatisticsis asimpleframeworkthat avoids thepitfallsof significance testing. It uses familiar statistical concepts: means,mean differences, and error bars. More importantly, it focuses on theeffect size of one’s experiment/intervention, as opposed to a falsedichotomy engendered byP values.
An estimation plot has two key features.
Itpresents all datapoints as a swarmplot, which orders eachpoint to display the underlying distribution.
It presents theeffect size as abootstrap 95% confidenceinterval on aseparate but aligned axes.
Thedabestr package powersestimationstats.com, allowing everyoneaccess to high-quality estimation plots.
# Install it from CRANinstall.packages("dabestr")# Or the development version from GitHub:# install.packages("devtools")devtools::install_github(repo="ACCLAB/dabestr",ref="dev")
library(dabestr)data("non_proportional_data")dabest_obj.mean_diff<- load(data=non_proportional_data,x=Group,y=Measurement,idx= c("Control 1","Test 1")) %>% mean_diff()dabest_plot(dabest_obj.mean_diff,TRUE)
Please refer to the officialtutorialfor more useful code snippets.
Moving beyond P values: Everyday data analysis with estimation plots
Joses Ho, Tayfun Tumkaya, Sameer Aryal, Hyungwon Choi, AdamClaridge-Chang
Nature Methods 2019, 1548-7105.10.1038/s41592-019-0470-3
Paywalled publishersite;Free-to-viewPDF
Please report any bugs on theGithub issuetracker.
All contributions are welcome; please read theGuidelines forcontributingfirst.
We also have aCode ofConductto foster an inclusive and productive space.
We would like to thank alpha testers from theClaridge-Changlab:SangyuXu,XianyuanZhang,FarhanMohammad, Jurga Mituzaitė, andStanislav Ott.
DABEST is also available in Python(DABEST-python)and Matlab(DABEST-Matlab).
About
Data Analysis with Bootstrap Estimation in R
Topics
Resources
License
Code of conduct
Contributing
Uh oh!
There was an error while loading.Please reload this page.
Stars
Watchers
Forks
Packages0
Uh oh!
There was an error while loading.Please reload this page.
Contributors10
Uh oh!
There was an error while loading.Please reload this page.

