Su(var)3-6, PP1α87B, PP1, Su-var(3)6, PP1 87B
Please see the JBrowse view ofDmel\Pp1-87B for information on other features
To submit a correction to a gene model please use theContact FlyBase form
AlphaFold produces a per-residue confidence score (pLDDT) between 0 and 100. Some regions with low pLDDT may be unstructured in isolation.
Gene model reviewed during 5.50
Low-frequency RNA-Seq exon junction(s) not annotated.
2.5, 1.6 (northern blot)
There is only one protein coding transcript and one polypeptide associated with this gene
302 (aa); 34.5 (kD predicted)
Interacts with Nop17l (PubMed:17007873). Interacts with uri; uri inhibits Pp1-87B phosphatase activity (PubMed:18412953). Interacts with Rif1 (PubMed:26022086,PubMed:29746464).
Click to get a list of regulatory features (enhancers, TFBS, etc.) and gene disruptions (point mutations, indels, etc.) within or overlapping Dmel\Pp1-87B using theFeature Mapper tool.
The testis specificity index was calculated from modENCODE tissue expression data byVedeleket al., 2018 to indicate the degree of testis enrichment compared to other tissues. Scores range from -2.52 (underrepresented) to 5.2 (very high testis bias).
The 1.6 and 2.5 kbPp1-87B transcripts are present thoroughout development.
JBrowse - Visual display of RNA-Seq signals
ViewDmel\Pp1-87B in JBrowse3-52
3-49.5
3-51.1 +/- 0.5
Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please seeJBrowse for alignment of the cDNAs and ESTs to the gene model.
For each fully sequenced cDNA the DGRC maintains various forms of the cDNA (e.g tagged or untagged) in several different host vectors for subsequent cloning and expression in Drosophila and Drosophila cell lines.
RNAi screen using dsRNA made from templates generated with primers directed against this gene results in aberrantly short spindles when assayed in S2 cells. This phenotype can be observed when the screen is performed with or withoutCdc27 dsRNA.
S2 cells treated with dsRNA generated against this gene show reduced phagocytosis of Candida albicans compared to untreated cells.
In a sample of 79 genes with multiple introns, 33 showed significant heterogeneity in G+C content among introns of the same gene and significant positive correspondence between the intron and the third codon position G+C content within genes. These results are consistent with selection adding against preferred codons at the start of genes.
Mutants block mitosis, alter heterochromatin and cause pupal lethality.
Flies deficient for protein phosphatase 1 show behavioral abnormalities, with impaired associative olfactory learning and visual conditioning. Also reduced mobility and flight activity.
Pp1-87B gene product is essential for germline development.
A haplo-dependent suppressor of position effect variegation without the triplo enhancer effect, flies with two additional copies show normal mottling.
Pp1-87B regulates the condensation state of chromatin during interphase.
Encodes a serine/threonine specific protein phosphatase.
Suppression ofIn(1)wm4 position effect variegation byPp1-87B was not reversed by a supernumerary copy ofSu(var)3-7.
Identification: Isolated from a Drosophila head cDNA library, using a rabbit muscle PP-1α cDNA as a probe.
Source for merge of: Pp1-87B l(3)j6E7
Source for merge of: Pp1-87B CG5650
ThePp1-87B gene may have been derived from a related phosphoprotein phosphatase gene by retroposition.