Movatterモバイル変換


[0]ホーム

URL:


Jump to content
WikipediaThe Free Encyclopedia
Search

Transcription factor II H

From Wikipedia, the free encyclopedia
Protein complex

general transcription factor IIH, polypeptide 1, 62kDa
Identifiers
SymbolGTF2H1
Alt. symbolsBTF2
NCBI gene2965
HGNC4655
OMIM189972
RefSeqNM_005316
UniProtP32780
Other data
LocusChr. 11p15.1-p14
Search for
StructuresSwiss-model
DomainsInterPro
general transcription factor IIH, polypeptide 2, 44kDa
Identifiers
SymbolGTF2H2
Alt. symbolsBTF2, TFIIH, BTF2P44, T-BTF2P44
NCBI gene2966
HGNC4656
OMIM601748
RefSeqNM_001515
UniProtQ13888
Other data
LocusChr. 5q12.2-13.3
Search for
StructuresSwiss-model
DomainsInterPro
general transcription factor IIH, polypeptide 3, 34kDa
Identifiers
SymbolGTF2H3
Alt. symbolsBTF2, TFIIH
NCBI gene2967
HGNC4657
OMIM601750
RefSeqNM_001516
UniProtQ13889
Other data
LocusChr. 12q24.31
Search for
StructuresSwiss-model
DomainsInterPro

Transcription factor II H (TFIIH) is a multi-subunitprotein complex involved in both the transcription ofprotein-coding genes and thenucleotide excision repair (NER) pathway. TFIIH was first identified in 1989 as general transcription factor-δ or basictranscription factor 2, an essential factor for transcription in vitro. It was subsequently isolated from yeast and officially named TFIIH in 1992.[1][2]

TFIIH is composed of ten subunits. Seven of these—ERCC2/XPD,ERCC3/XPB,GTF2H1/p62,GTF2H4/p52,GTF2H2/p44,GTF2H3/p34, andGTF2H5/TTDA—constitute the core complex. The remaining three subunits—CDK7, MAT1, andcyclin H—form the cyclin-activating kinase (CAK) subcomplex, which is tethered to the core via the XPD protein.[3] Among the core subunits,ERCC2/XPD andERCC3/XPB possesshelicase andATPase activities and are essential for unwinding DNA to form thetranscription bubble. These activities are necessary during transcription in vitro only when the DNA template is not alreadydenatured or issupercoiled.

The CAK subunits,CDK7 andcyclin H, are responsible for thephosphorylation ofserine residues in theC-terminal domain of RNA polymerase II, as well as potentially other targets involved in thecell cycle. In addition to its essential role in transcription initiation, TFIIH also plays a critical part innucleotide excision repair.

History

[edit]

Before being designated as TFIIH, the complex was known by several names. It was first isolated in 1989 from rat liver and referred to as transcription factor δ. When identified in cancer cells, it was called basic transcription factor 2, and when isolated from yeast, it was known as transcription factor B. The complex was officially named TFIIH in 1992.[4]

Structure

[edit]

TFIIH is a ten‐subunit complex; seven of these subunits comprise the "core" whereas three comprise the dissociable "CAK" (CDK-activating Kinase) module.[5] The core consists of subunits XPB, XPD,p62,p52, p44,p34 andp8 while CAK is composed ofCDK7,cyclin H, andMAT1.[5]

Function

[edit]

General functions of TFIIH include:

  1. Initiating transcription of protein-coding genes[6]
  2. Repairing DNA[6]

Gene transcription

[edit]

TFIIH is a generaltranscription factor that helps recruitRNA polymerase II (Pol II) togene promoters. It acts as a DNAtranslocase, sliding along the DNA while feeding it into the RNA polymerase II cleft, thereby generating torsional strain that facilitates localDNA unwinding.[7]TFIIH also plays a critical role innucleotide excision repair (NER), where it unwinds DNA at sites of damage following lesion recognition by either the global genome repair (GGR) or transcription-coupled repair (TCR) pathway.[8][9]

DNA repair

[edit]
Mechanism of TFIIH repairing DNA damaged sequence

TFIIH participates innucleotide excision repair (NER) by opening theDNA double helix after damage is initially recognized. NER is a multi-step pathway that removes a wide range of different types of damage that distort normal base pairing, including bulky chemical damage and UV-induced damage. Individuals with mutational defects in genes specifying protein components that catalyze the NER pathway, including the TFIIH components, often display features ofpremature aging.[10][11]

Clinical significance

[edit]

Trichothiodystrophy

[edit]

Mutation in genesERCC3 (XPB),ERCC2 (XPD) orGTF2H5 (TTDA) causetrichothiodystrophy, a condition characterized byphotosensitivity,ichthyosis, brittle hair and nails, intellectual impairment, decreased fertility and/or short stature.[10]

Cancer

[edit]

Genetic polymorphisms of genes that encode subunits of TFIIH are known to be associated with increased cancer susceptibility in many tissues, e.g. skin tissue, breast tissue and lung tissue. Mutations in the subunits (such as XPD and XPB) can lead to a variety of diseases, includingxeroderma pigmentosum (XP) or XP combined withCockayne syndrome.[12]

Viral infection

[edit]

Virus-encoded proteins target TFIIH.[13]

Inhibitors

[edit]

Potent, bioactive natural products such astriptolide, which inhibit mammalian transcription by targeting the XPB subunit of the general transcription factor TFIIH, have recently been developed as glucose conjugates to selectively target hypoxic cancer cells with elevated glucose transporter expression.[14]

References

[edit]
  1. ^Flores O, Lu H, Reinberg D (February 1992)."Factors involved in specific transcription by mammalian RNA polymerase II. Identification and characterization of factor IIH".The Journal of Biological Chemistry.267 (4):2786–2793.doi:10.1016/S0021-9258(18)45947-9.PMID 1733973.
  2. ^Kim TK,Ebright RH, Reinberg D (May 2000). "Mechanism of ATP-dependent promoter melting by transcription factor IIH".Science.288 (5470). New York, N.Y.:1418–1422.Bibcode:2000Sci...288.1418K.doi:10.1126/science.288.5470.1418.PMID 10827951.
  3. ^Lee TI, Young RA (2000). "Transcription of eukaryotic protein-coding genes".Annual Review of Genetics.34:77–137.doi:10.1146/annurev.genet.34.1.77.PMID 11092823.
  4. ^Rimel JK, Taatjes DJ (June 2018)."The essential and multifunctional TFIIH complex".Protein Science.27 (6):1018–1037.doi:10.1002/pro.3424.PMC 5980561.PMID 29664212.
  5. ^abDrapkin R, Reardon JT, Ansari A, Huang JC, Zawel L, Ahn K, et al. (April 1994). "Dual role of TFIIH in DNA excision repair and in transcription by RNA polymerase II".Nature.368 (6473):769–772.Bibcode:1994Natur.368..769D.doi:10.1038/368769a0.PMID 8152490.S2CID 4363484.
  6. ^abCompe E, Egly JM (May 2012)."TFIIH: when transcription met DNA repair".Nature Reviews. Molecular Cell Biology.13 (6):343–354.doi:10.1038/nrm3350.PMID 22572993.S2CID 29077515.
  7. ^Fishburn J, Tomko E, Galburt E, Hahn S (2015)."Double-stranded DNA translocase activity of transcription factor TFIIH and the mechanism of RNA polymerase II open complex formation".Proceedings of the National Academy of Sciences of the United States of America.112 (13):3961–3966.Bibcode:2015PNAS..112.3961F.doi:10.1073/pnas.1417709112.PMC 4386358.PMID 25775526.
  8. ^Hoogstraten D, Nigg AL, Heath H, Mullenders LH, van Driel R, Hoeijmakers JH, et al. (November 2002)."Rapid switching of TFIIH between RNA polymerase I and II transcription and DNA repair in vivo".Molecular Cell.10 (5):1163–1174.doi:10.1016/s1097-2765(02)00709-8.PMID 12453423.
  9. ^Assfalg R, Lebedev A, Gonzalez OG, Schelling A, Koch S, Iben S (January 2012)."TFIIH is an elongation factor of RNA polymerase I".Nucleic Acids Research.40 (2):650–659.doi:10.1093/nar/gkr746.PMC 3258137.PMID 21965540.
  10. ^abTheil AF, Hoeijmakers JH, Vermeulen W (November 2014). "TTDA: big impact of a small protein".Experimental Cell Research.329 (1):61–68.doi:10.1016/j.yexcr.2014.07.008.PMID 25016283.
  11. ^Edifizi D, Schumacher B (August 2015)."Genome Instability in Development and Aging: Insights from Nucleotide Excision Repair in Humans, Mice, and Worms".Biomolecules.5 (3):1855–1869.doi:10.3390/biom5031855.PMC 4598778.PMID 26287260.
  12. ^Oh KS, Khan SG, Jaspers NG, Raams A, Ueda T, Lehmann A, et al. (November 2006)."Phenotypic heterogeneity in the XPB DNA helicase gene (ERCC3): xeroderma pigmentosum without and with Cockayne syndrome".Human Mutation.27 (11):1092–1103.doi:10.1002/humu.20392.PMID 16947863.S2CID 22852219.
  13. ^Le May N, Dubaele S, Proietti De Santis L, Billecocq A, Bouloy M, Egly JM (February 2004)."TFIIH transcription factor, a target for the Rift Valley hemorrhagic fever virus".Cell.116 (4):541–550.doi:10.1016/s0092-8674(04)00132-1.PMID 14980221.S2CID 14312462.
  14. ^Datan E, Minn I, Peng X, He QL, Ahn H, Yu B, et al. (Sep 2020)."A Glucose-Triptolide Conjugate Selectively Targets Cancer Cells under Hypoxia".iScience.23 (9) 101536.Bibcode:2020iSci...23j1536D.doi:10.1016/j.isci.2020.101536.PMC 7509213.PMID 33083765.

External links

[edit]
(1) Basic domains
(1.1) Basicleucine zipper (bZIP)
(1.2) Basic helix-loop-helix (bHLH)
Group A
Group B
Group C
bHLH-PAS
Group D
Group E
Group F
bHLH-COE
(1.3)bHLH-ZIP
(1.4) NF-1
(1.5) RF-X
(1.6) Basic helix-span-helix (bHSH)
(2)Zinc finger DNA-binding domains
(2.1)Nuclear receptor(Cys4)
subfamily 1
subfamily 2
subfamily 3
subfamily 4
subfamily 5
subfamily 6
subfamily 0
(2.2) Other Cys4
(2.3) Cys2His2
(2.4) Cys6
(2.5) Alternating composition
(2.6) WRKY
(3.1)Homeodomain
Antennapedia
ANTP class
protoHOX
Hox-like
metaHOX
NK-like
other
(3.2) Paired box
(3.3)Fork head /winged helix
(3.4)Heat shock factors
(3.5) Tryptophan clusters
(3.6) TEA domain
  • transcriptional enhancer factor
(4)β-Scaffold factors with minor groove contacts
(4.1)Rel homology region
(4.2)STAT
(4.3) p53-like
(4.4)MADS box
(4.6)TATA-binding proteins
(4.7)High-mobility group
(4.9) Grainyhead
(4.10) Cold-shock domain
(4.11) Runt
(0) Other transcription factors
(0.2) HMGI(Y)
(0.3)Pocket domain
(0.5)AP-2/EREBP-related factors
(0.6) Miscellaneous


Stub icon

Thisbiochemistry article is astub. You can help Wikipedia byadding missing information.

Retrieved from "https://en.wikipedia.org/w/index.php?title=Transcription_factor_II_H&oldid=1318048610"
Categories:
Hidden categories:

[8]ページ先頭

©2009-2026 Movatter.jp