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TAAR6

From Wikipedia, the free encyclopedia
Protein and coding gene in humans
TAAR6
Identifiers
AliasesTAAR6, TA4, TAR4, TAR6, TRAR4, taR-4, taR-6, trace amine associated receptor 6
External IDsOMIM:608923;MGI:2685074;HomoloGene:27874;GeneCards:TAAR6;OMA:TAAR6 - orthologs
Gene location (Human)
Chromosome 6 (human)
Chr.Chromosome 6 (human)[1]
Chromosome 6 (human)
Genomic location for TAAR6
Genomic location for TAAR6
Band6q23.2Start132,570,322bp[1]
End132,571,359bp[1]
Gene location (Mouse)
Chromosome 10 (mouse)
Chr.Chromosome 10 (mouse)[2]
Chromosome 10 (mouse)
Genomic location for TAAR6
Genomic location for TAAR6
Band10|10 A4Start23,860,507bp[2]
End23,861,544bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • ganglionic eminence

  • renal cortex

  • blood

  • temporal lobe

  • amygdala

  • adrenal gland

  • human kidney
Top expressed in
  • Grüneberg ganglion

  • nasal septum
More reference expression data
BioGPS
More reference expression data
Gene ontology
Molecular function
Cellular component
Biological process
Sources:Amigo /QuickGO
Orthologs
SpeciesHumanMouse
Entrez

319100

215855

Ensembl

ENSG00000146383

ENSMUSG00000045111

UniProt

Q96RI8

Q5QD13

RefSeq (mRNA)

NM_175067

NM_001010828

RefSeq (protein)

NP_778237

NP_001010828

Location (UCSC)Chr 6: 132.57 – 132.57 MbChr 10: 23.86 – 23.86 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

Trace amine associated receptor 6, also known asTAAR6, is aprotein which in humans is encoded by theTAAR6gene.[5][6]

Function

[edit]

TAAR6 belongs to thetrace amine-associated receptor family. Trace amines are endogenous amine compounds that are chemically similar to classic biogenic amines likedopamine,norepinephrine,serotonin, andhistamine. Trace amines were thought to be 'false transmitters' that displace classicbiogenic amines from their storage and act on transporters in a fashion similar to theamphetamines, but the identification of brain receptors specific to trace amines indicates that they also have effects of their own.[7][8] RNA expression analysis shows hTAAR6 is expressed in the hippocampus, where murine TAAR receptors have been shown to be involved with neurogenesis.[9]

Computational modeling suggests TAAR6 can bind to the foul smelling compounds produced by rotting flesh,putrescine andcadaverine.[10]

TAAR6 mutant mice have differences in behavior compared with wild-type mice.[11] Also, they have elevated brainserotonin levels in several brain regions and enhanced hypothermic response to5-HT1A receptor agonist8-OH-DPAT.[12]

References

[edit]
  1. ^abcGRCh38: Ensembl release 89: ENSG00000146383Ensembl, May 2017
  2. ^abcGRCm38: Ensembl release 89: ENSMUSG00000045111Ensembl, May 2017
  3. ^"Human PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^"Mouse PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^Borowsky B, Adham N, Jones KA, Raddatz R, Artymyshyn R, Ogozalek KL, et al. (July 2001)."Trace amines: identification of a family of mammalian G protein-coupled receptors".Proceedings of the National Academy of Sciences of the United States of America.98 (16):8966–71.doi:10.1073/pnas.151105198.PMC 55357.PMID 11459929.
  6. ^Lindemann L, Ebeling M, Kratochwil NA, Bunzow JR, Grandy DK, Hoener MC (March 2005). "Trace amine-associated receptors form structurally and functionally distinct subfamilies of novel G protein-coupled receptors".Genomics.85 (3):372–85.doi:10.1016/j.ygeno.2004.11.010.PMID 15718104.
  7. ^Duan J, Martinez M, Sanders AR, Hou C, Saitou N, Kitano T, et al. (October 2004)."Polymorphisms in the trace amine receptor 4 (TRAR4) gene on chromosome 6q23.2 are associated with susceptibility to schizophrenia".American Journal of Human Genetics.75 (4):624–38.doi:10.1086/424887.PMC 1182049.PMID 15329799.
  8. ^"Entrez Gene: TAAR6 trace amine associated receptor 6".
  9. ^Katolikova NV, Vaganova AN, Efimova EV, Gainetdinov RR (June 2022)."Expression of Trace Amine-Associated Receptors in the Murine and Human Hippocampus Based on Public Transcriptomic Data".Cells.11 (11): 1813.doi:10.3390/cells11111813.PMC 9180029.PMID 35681508.
  10. ^Izquierdo C, Gómez-Tamayo JC, Nebel JC, Pardo L, Gonzalez A (January 2018)."Identifying human diamine sensors for death related putrescine and cadaverine molecules".PLOS Computational Biology.14 (1) e1005945.Bibcode:2018PLSCB..14E5945I.doi:10.1371/journal.pcbi.1005945.PMC 5783396.PMID 29324768.
  11. ^Kuvarzin S, Leonova E, Efimova E, Gainetdinov R (December 2019)."Identifying the function of trace amine-associated receptor 6 and its role in behavior, physiology and brain neurochemistry".European Neuropsychopharmacology.29. Elsevier: S93.doi:10.1016/j.euroneuro.2019.09.164.S2CID 209352329.
  12. ^Kuvarzin S, Efimova E, Gainetdinov R (December 2021)."TAAR6 mutant mice have changes in the brain serotonin levels and enhanced hypothermic response to serotonin 5-HT1A receptor agonist 8-OH-DPAT".European Neuropsychopharmacology.53. Elsevier:S212–S213.doi:10.1016/j.euroneuro.2021.10.279.S2CID 245564698.

Further reading

[edit]

This article incorporates text from theUnited States National Library of Medicine, which is in thepublic domain.

TAAR1Tooltip Trace amine-associated receptor 1
Agonists
Endogenous
Exogenous
Antagonists
Inverse agonists
TAAR5Tooltip Trace amine-associated receptor 5
Agonists
Inverse agonists
Notes: (1) TAAR1 activity of ligands varies significantly between species. Some agents that are TAAR1 ligands in some species are not in other species. This navbox includes all TAAR1 ligands regardless of species. (2) See the individual pages for references, as well as theList of trace amines,TAAR, andTAAR1 pages.
See also:Receptor/signaling modulators
Neurotransmitter
Adrenergic
Purinergic
Serotonin
Other
Metabolites and
signaling molecules
Eicosanoid
Other
Peptide
Neuropeptide
Other
Miscellaneous
Taste, bitter
Orphan
Other
Adhesion
Orphan
Other
Taste, sweet
Other
Frizzled
Smoothened


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