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Syndecan 1

From Wikipedia, the free encyclopedia
Protein which in humans is encoded by the SDC1 gene
SDC1
Available structures
PDBOrtholog search:PDBeRCSB
List of PDB id codes

4GVC,4GVD

Identifiers
AliasesSDC1, CD138, SDC, SYND1, syndecan, syndecan 1
External IDsOMIM:186355;MGI:1349162;HomoloGene:2252;GeneCards:SDC1;OMA:SDC1 - orthologs
Gene location (Human)
Chromosome 2 (human)
Chr.Chromosome 2 (human)[1]
Chromosome 2 (human)
Genomic location for SDC1
Genomic location for SDC1
Band2p24.1Start20,200,797bp[1]
End20,225,433bp[1]
Gene location (Mouse)
Chromosome 12 (mouse)
Chr.Chromosome 12 (mouse)[2]
Chromosome 12 (mouse)
Genomic location for SDC1
Genomic location for SDC1
Band12 A1.1|12 3.94 cMStart8,821,323bp[2]
End8,843,715bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • skin of abdomen

  • mucosa of pharynx

  • right lobe of liver

  • skin of limb

  • skin of leg

  • gums

  • skin of arm

  • skin of thigh

  • gingival epithelium

  • vulva
Top expressed in
  • cumulus cell

  • transitional epithelium of urinary bladder

  • molar

  • conjunctival fornix

  • skin of abdomen

  • lip

  • hair follicle

  • external carotid artery

  • condyle

  • skin of external ear
More reference expression data
BioGPS


More reference expression data
Gene ontology
Molecular function
Cellular component
Biological process
Sources:Amigo /QuickGO
Orthologs
SpeciesHumanMouse
Entrez

6382

20969

Ensembl

ENSG00000115884

ENSMUSG00000020592

UniProt

P18827

P18828

RefSeq (mRNA)

NM_001006946
NM_002997

NM_011519

RefSeq (protein)

NP_001006947
NP_002988

NP_035649

Location (UCSC)Chr 2: 20.2 – 20.23 MbChr 12: 8.82 – 8.84 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

Syndecan 1 is aprotein which in humans is encoded by theSDC1gene.[5][6] The protein is a transmembrane (type I)heparan sulfateproteoglycan and is a member of thesyndecan proteoglycan family. The syndecan-1 protein functions as anintegral membrane protein and participates incell proliferation,cell migration andcell-matrix interactions via its receptor for extracellular matrix proteins. Syndecan-1 is a sponge for growth factors and chemokines,[7] with binding largely via heparan sulfate chains. The syndecans mediate cell binding,cell signaling, andcytoskeletal organization and syndecan receptors are required for internalization of the HIV-1tat protein.

Altered syndecan-1 expression has been detected in several different tumor types. Syndecan 1 can be a marker forplasma cells.

Structure

[edit]

The syndecan-1 core protein consists of an extracellular domain which can be substituted with heparan sulfate andchondroitin sulfateglycosaminoglycan chains, a highly conserved transmembrane domain, and a highly conserved cytoplasmic domain, which contains two constant regions that are separated by a variable region.[8] The extracellular domain can be cleaved (shed) from the cell surface at a juxtamembrane site,[9] converting the membrane-bound proteoglycan into a paracrine effector molecule with roles in wound repair[10] and invasive growth of cancer cells.[11]

An exception is the prosecretory mitogenlacritin that binds syndecan-1 only after heparanase modification.[12][13] Binding utilizes an enzyme-regulated 'off-on' switch in which active epithelialheparanase (HPSE) cleaves off heparan sulfate to expose a binding site in the N-terminal region of syndecan-1's core protein.[12] Three SDC1 elements are required. (1) The heparanase-exposed hydrophobic sequence GAGAL that promotes the alpha helicity of lacritin's C-terminal amphipathic alpha helix form and likely binds to the hydrophobic face. (2) Heparanase-cleaved heparan sulfate that is 3-O sulfated.[13] This likely interacts with the cationic face of lacritin's C-terminal amphipathic alpha helix. (3) An N-terminal chondroitin sulfate chain that also likely binds to the cationic face. Point mutagenesis of lacritin has narrowed the ligation site.[13]

While severaltranscript variants may exist for this gene, the full-length natures of only two have been described to date. These two represent the major variants of this gene and encode the same protein.[14]

Inflammation

[edit]

Syndecan-1 deficient mice show increased inflammation, which was attributed to an increasedICAM-1 and heparan sulfate-dependent recruitment ofleukocytes (includingneutrophils anddendritic cells)[15] to the inflamedendothelium.[16] This increase results in higher inflammatory responses and tissue damage in experimental models ofcontact dermatitis,[17] inflammation of thekidney,[18]myocardial infarction,[19]inflammatory bowel disease[20] andexperimental autoimmune encephalomyelitis[21] In experimentalcolitis-inducedcolon carcinoma, syndecan-1 deficiency promotes tumor growth in anIL-6 /STAT-signaling-dependent manner.[22]

Clinical significance

[edit]

Altered syndecan-1 expression has been detected in several different tumor types.[23][24] Inbreast cancer, syndecan-1 is up regulated and contributes to thecancer stem cell phenotype, which is linked to increased resistance tochemotherapy and radiation therapy[25][26][27]

It is a specific antigen onmultiple myeloma cells.[28]Indatuximab ravtansine targets this protein.

Application

[edit]

It is a useful marker forplasma cells,[29] but only if the cells tested are already known to be derived from blood.[30] For plasma cells, it usually stains intensely membranous, with or without associated diffuse weak cytoplasmic and/or Golgi staining.[31] Few cases show cytoplasmic granular staining, with or without associated Golgi staining.[31]

References

[edit]
  1. ^abcGRCh38: Ensembl release 89: ENSG00000115884Ensembl, May 2017
  2. ^abcGRCm38: Ensembl release 89: ENSMUSG00000020592Ensembl, May 2017
  3. ^"Human PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^"Mouse PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^Mali M, Jaakkola P, Arvilommi AM, Jalkanen M (April 1990)."Sequence of human syndecan indicates a novel gene family of integral membrane proteoglycans".The Journal of Biological Chemistry.265 (12):6884–6889.doi:10.1016/S0021-9258(19)39232-4.PMID 2324102.
  6. ^Ala-Kapee M, Nevanlinna H, Mali M, Jalkanen M, Schröder J (September 1990). "Localization of gene for human syndecan, an integral membrane proteoglycan and a matrix receptor, to chromosome 2".Somatic Cell and Molecular Genetics.16 (5):501–505.doi:10.1007/BF01233200.PMID 2173154.S2CID 43270934.
  7. ^Götte M (April 2003)."Syndecans in inflammation".FASEB Journal.17 (6):575–591.doi:10.1096/fj.02-0739rev.PMID 12665470.S2CID 16948257.
  8. ^Bernfield M, Götte M, Park PW, Reizes O, Fitzgerald ML, Lincecum J, Zako M (1999). "Functions of cell surface heparan sulfate proteoglycans".Annual Review of Biochemistry.68:729–777.doi:10.1146/annurev.biochem.68.1.729.PMID 10872465.
  9. ^Wang Z, Götte M, Bernfield M, Reizes O (September 2005)."Constitutive and accelerated shedding of murine syndecan-1 is mediated by cleavage of its core protein at a specific juxtamembrane site".Biochemistry.44 (37):12355–12361.doi:10.1021/bi050620i.PMC 2546870.PMID 16156648.
  10. ^Elenius V, Götte M, Reizes O, Elenius K, Bernfield M (October 2004)."Inhibition by the soluble syndecan-1 ectodomains delays wound repair in mice overexpressing syndecan-1".The Journal of Biological Chemistry.279 (40):41928–41935.doi:10.1074/jbc.M404506200.PMID 15220342.
  11. ^Piperigkou Z, Mohr B, Karamanos N, Götte M (September 2016)."Shed proteoglycans in tumor stroma".Cell and Tissue Research.365 (3):643–655.doi:10.1007/s00441-016-2452-4.PMID 27365088.S2CID 13944019.
  12. ^abMa P, Beck SL, Raab RW, McKown RL, Coffman GL, Utani A, et al. (September 2006)."Heparanase deglycanation of syndecan-1 is required for binding of the epithelial-restricted prosecretory mitogen lacritin".The Journal of Cell Biology.174 (7):1097–1106.doi:10.1083/jcb.200511134.PMC 1666580.PMID 16982797.
  13. ^abcZhang Y, Wang N, Raab RW, McKown RL, Irwin JA, Kwon I, et al. (April 2013)."Targeting of heparanase-modified syndecan-1 by prosecretory mitogen lacritin requires conserved core GAGAL plus heparan and chondroitin sulfate as a novel hybrid binding site that enhances selectivity".The Journal of Biological Chemistry.288 (17):12090–12101.doi:10.1074/jbc.M112.422717.PMC 3636894.PMID 23504321.
  14. ^"Entrez Gene: SDC1 syndecan 1".
  15. ^Averbeck M, Kuhn S, Bühligen J, Götte M, Simon JC, Polte T (November 2017). "Syndecan-1 regulates dendritic cell migration in cutaneous hypersensitivity to haptens".Experimental Dermatology.26 (11):1060–1067.doi:10.1111/exd.13374.PMID 28453867.S2CID 38757296.
  16. ^Götte M, Joussen AM, Klein C, Andre P, Wagner DD, Hinkes MT, et al. (April 2002)."Role of syndecan-1 in leukocyte-endothelial interactions in the ocular vasculature".Investigative Ophthalmology & Visual Science.43 (4):1135–1141.PMID 11923257.
  17. ^Kharabi Masouleh B, Ten Dam GB, Wild MK, Seelige R, van der Vlag J, Rops AL, et al. (April 2009)."Role of the heparan sulfate proteoglycan syndecan-1 (CD138) in delayed-type hypersensitivity".Journal of Immunology.182 (8):4985–4993.doi:10.4049/jimmunol.0800574.PMID 19342678.
  18. ^Rops AL, Götte M, Baselmans MH, van den Hoven MJ, Steenbergen EJ, Lensen JF, et al. (November 2007)."Syndecan-1 deficiency aggravates anti-glomerular basement membrane nephritis".Kidney International.72 (10):1204–1215.doi:10.1038/sj.ki.5002514.PMID 17805240.
  19. ^Vanhoutte D, Schellings MW, Götte M, Swinnen M, Herias V, Wild MK, et al. (January 2007)."Increased expression of syndecan-1 protects against cardiac dilatation and dysfunction after myocardial infarction"(PDF).Circulation.115 (4):475–482.doi:10.1161/CIRCULATIONAHA.106.644609.PMID 17242279.
  20. ^Floer M, Götte M, Wild MK, Heidemann J, Gassar ES, Domschke W, et al. (January 2010)."Enoxaparin improves the course of dextran sodium sulfate-induced colitis in syndecan-1-deficient mice".The American Journal of Pathology.176 (1):146–157.doi:10.2353/ajpath.2010.080639.PMC 2797877.PMID 20008145.
  21. ^Zhang X, Wu C, Song J, Götte M, Sorokin L (November 2013)."Syndecan-1, a cell surface proteoglycan, negatively regulates initial leukocyte recruitment to the brain across the choroid plexus in murine experimental autoimmune encephalomyelitis".Journal of Immunology.191 (9):4551–4561.doi:10.4049/jimmunol.1300931.PMID 24078687.
  22. ^Binder Gallimidi A, Nussbaum G, Hermano E, Weizman B, Meirovitz A, Vlodavsky I, et al. (2017)."Syndecan-1 deficiency promotes tumor growth in a murine model of colitis-induced colon carcinoma".PLOS ONE.12 (3) e0174343.Bibcode:2017PLoSO..1274343B.doi:10.1371/journal.pone.0174343.PMC 5369774.PMID 28350804.
  23. ^Yip GW, Smollich M, Götte M (September 2006)."Therapeutic value of glycosaminoglycans in cancer"(PDF).Molecular Cancer Therapeutics.5 (9):2139–2148.doi:10.1158/1535-7163.MCT-06-0082.PMID 16985046.
  24. ^Stepp MA, Pal-Ghosh S, Tadvalkar G, Pajoohesh-Ganji A (April 2015)."Syndecan-1 and Its Expanding List of Contacts".Advances in Wound Care.4 (4):235–249.doi:10.1089/wound.2014.0555.PMC 4397989.PMID 25945286.
  25. ^Hassan H, Greve B, Pavao MS, Kiesel L, Ibrahim SA, Götte M (May 2013). "Syndecan-1 modulates β-integrin-dependent and interleukin-6-dependent functions in breast cancer cell adhesion, migration, and resistance to irradiation".The FEBS Journal.280 (10):2216–2227.doi:10.1111/febs.12111.PMID 23289672.S2CID 19929711.
  26. ^Ibrahim SA, Gadalla R, El-Ghonaimy EA, Samir O, Mohamed HT, Hassan H, et al. (March 2017)."Syndecan-1 is a novel molecular marker for triple negative inflammatory breast cancer and modulates the cancer stem cell phenotype via the IL-6/STAT3, Notch and EGFR signaling pathways".Molecular Cancer.16 (1): 57.doi:10.1186/s12943-017-0621-z.PMC 5341174.PMID 28270211.
  27. ^Götte M, Kersting C, Ruggiero M, Tio J, Tulusan AH, Kiesel L, Wülfing P (2006)."Predictive value of syndecan-1 expression for the response to neoadjuvant chemotherapy of primary breast cancer".Anticancer Research.26 (1B):621–627.PMID 16739330.
  28. ^Indatuximab Ravtansine (BT062) In Combination With Lenalidomide and Low-Dose Dexamethasone In Patients With Relapsed and/Or Refractory Multiple Myeloma: Clinical Activity In Len/Dex-Refractory Patients
  29. ^Rawstron AC (May 2006). "Chapter 6: Immunophenotyping of plasma cells".Current Protocols in Cytometry. Vol. Chapter 6. pp. Unit 6.23.doi:10.1002/0471142956.cy0623s36.ISBN 0-471-14295-6.PMID 18770841.S2CID 19511070.
  30. ^O'Connell FP, Pinkus JL,Pinkus GS (February 2004)."CD138 (syndecan-1), a plasma cell marker immunohistochemical profile in hematopoietic and nonhematopoietic neoplasms".American Journal of Clinical Pathology.121 (2):254–263.doi:10.1309/617D-WB5G-NFWX-HW4L.PMID 14983940.[permanent dead link]
  31. ^abAl-Quran SZ, Yang L, Magill JM, Braylan RC, Douglas-Nikitin VK (December 2007)."Assessment of bone marrow plasma cell infiltrates in multiple myeloma: the added value of CD138 immunohistochemistry".Human Pathology.38 (12):1779–1787.doi:10.1016/j.humpath.2007.04.010.PMC 3419754.PMID 17714757.

Further reading

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