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Signal-regulatory protein alpha

From Wikipedia, the free encyclopedia
Protein-coding gene in the species Homo sapiens

SIRPA
Available structures
PDBOrtholog search:PDBeRCSB
List of PDB id codes

2JJS,2JJT,2UV3,2WNG,4CMM

Identifiers
AliasesSIRPA, BIT, CD172A, MFR, MYD-1, P84, PTPNS1, SHPS1, SIRP, Signal-regulatory protein alpha, signal regulatory protein alpha
External IDsOMIM:602461;MGI:108563;HomoloGene:7246;GeneCards:SIRPA;OMA:SIRPA - orthologs
Gene location (Human)
Chromosome 20 (human)
Chr.Chromosome 20 (human)[1]
Chromosome 20 (human)
Genomic location for SIRPA
Genomic location for SIRPA
Band20p13Start1,894,167bp[1]
End1,940,592bp[1]
Gene location (Mouse)
Chromosome 2 (mouse)
Chr.Chromosome 2 (mouse)[2]
Chromosome 2 (mouse)
Genomic location for SIRPA
Genomic location for SIRPA
Band2 F1|2 63.19 cMStart129,434,755bp[2]
End129,474,148bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • right frontal lobe

  • Brodmann area 9

  • right hemisphere of cerebellum

  • postcentral gyrus

  • lateral nuclear group of thalamus

  • prefrontal cortex

  • superior frontal gyrus

  • amygdala

  • middle temporal gyrus

  • nucleus accumbens
Top expressed in
  • stroma of bone marrow

  • granulocyte

  • prefrontal cortex

  • superior frontal gyrus

  • primary visual cortex

  • dentate gyrus of hippocampal formation granule cell

  • cerebellar cortex

  • tibiofemoral joint

  • perirhinal cortex

  • entorhinal cortex
More reference expression data
BioGPS




More reference expression data
Gene ontology
Molecular function
Cellular component
Biological process
Sources:Amigo /QuickGO
Orthologs
SpeciesHumanMouse
Entrez

140885

19261

Ensembl

ENSG00000198053

ENSMUSG00000037902

UniProt

P78324

P97797

RefSeq (mRNA)

NM_001040022
NM_001040023
NM_080792
NM_001330728

NM_001177646
NM_001177647
NM_001291019
NM_001291020
NM_001291021

NM_001291022
NM_007547
NM_001355158
NM_001355160

RefSeq (protein)

NP_001035111
NP_001035112
NP_001317657
NP_542970

NP_001171118
NP_001277948
NP_001277949
NP_001277950
NP_001277951

NP_031573
NP_001342087
NP_001342089

Location (UCSC)Chr 20: 1.89 – 1.94 MbChr 2: 129.43 – 129.47 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

Signal regulatory protein α (SIRPα) is a regulatory membrane glycoprotein from SIRP family expressed mainly by myeloid cells and also by stem cells[citation needed] or neurons.

SIRPα acts as inhibitory receptor and interacts with a broadly expressed transmembrane proteinCD47 also called the "don't eat me" signal. This interaction negatively controls effector function ofinnate immune cells such as host cellphagocytosis. SIRPα diffuses laterally on themacrophage membrane and accumulates at a phagocytic synapse to bind CD47 and signal 'self', which inhibits the cytoskeleton-intensive process of phagocytosis by the macrophage.[5] This is analogous to the self signals provided byMHC class I molecules toNK cells via Ig-like orLy49 receptors.[6][7] NB. Protein shown to the right is CD47 not SIRP α.

Structure

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The cytoplasmic region of SIRPα is highly conserved between rats, mice and humans. Cytoplasmic region contains a number oftyrosine residues, which likely act asITIMs. Upon CD47 ligation, SIRPα is phosphorylated and recruits phosphatases like SHP1 andSHP2.[8] The extracellular region contains threeImmunoglobulin superfamily domains – single V-set and two C1-setIgSF domains. SIRP β and γ have the similar extracellular structure but different cytoplasmic regions giving contrasting types of signals. SIRP α polymorphisms are found in ligand-bindingIgSF V-set domain but it does not affect ligand binding. One idea is that the polymorphism is important to protect the receptor of pathogens binding.[6][9]

Ligands

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SIRPα recognizesCD47, an anti-phagocytic signal that distinguishes live cells from dying cells. CD47 has a single Ig-like extracellular domain and five membrane spanning regions. The interaction between SIRPα and CD47 can be modified byendocytosis or cleavage of the receptor, or interaction withsurfactant proteins.Surfactant protein A andD are soluble ligands, highly expressed in the lungs, that bind to the same region of SIRPα asCD47 and can therefore competitively block binding.[9][10]

Signalling

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The extracellular domain of SIRP α binds toCD47 and transmits intracellular signals through its cytoplasmic domain. CD47-binding is mediated through theNH2-terminalV-like domain of SIRP α. The cytoplasmic region contains fourITIMs that become phosphorylated after binding of ligand. The phosphorylation mediates activation of tyrosine kinaseSHP2. SIRP α has been shown to bind also phosphataseSHP1, adaptor proteinSCAP2 andFYN-binding protein. Recruitment of SHP phosphatases to the membrane leads to the inhibition ofmyosin accumulation at the cell surface and results in the inhibition ofphagocytosis.[9][10]

Cancer

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Cancer cells highly expressedCD47 that activate SIRP α and inhibitmacrophage-mediated destruction. In one study, they engineered high-affinity variants of SIRP α that antagonizedCD47 on cancer cells and caused increasephagocytosis of cancer cells.[11] Another study (in mice) found anti-SIRPα antibodies helped macrophages to reduce cancer growth and metastasis, alone and in synergy with other cancer treatments.[12][13]

References

[edit]
  1. ^abcGRCh38: Ensembl release 89: ENSG00000198053Ensembl, May 2017
  2. ^abcGRCm38: Ensembl release 89: ENSMUSG00000037902Ensembl, May 2017
  3. ^"Human PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^"Mouse PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^Tsai RK, Discher DE (March 2008)."Inhibition of "self" engulfment through deactivation of myosin-II at the phagocytic synapse between human cells".The Journal of Cell Biology.180 (5):989–1003.doi:10.1083/jcb.200708043.PMC 2265407.PMID 18332220.
  6. ^abBarclay AN (February 2009)."Signal regulatory protein alpha (SIRPalpha)/CD47 interaction and function".Current Opinion in Immunology.21 (1):47–52.doi:10.1016/j.coi.2009.01.008.PMC 3128989.PMID 19223164.
  7. ^Stefanidakis M, Newton G, Lee WY, Parkos CA, Luscinskas FW (August 2008)."Endothelial CD47 interaction with SIRPgamma is required for human T-cell transendothelial migration under shear flow conditions in vitro".Blood.112 (4):1280–1289.doi:10.1182/blood-2008-01-134429.PMC 2515120.PMID 18524990.
  8. ^Okazawa H, Motegi S, Ohyama N, Ohnishi H, Tomizawa T, Kaneko Y, et al. (February 2005)."Negative regulation of phagocytosis in macrophages by the CD47-SHPS-1 system".Journal of Immunology.174 (4):2004–2011.doi:10.4049/jimmunol.174.4.2004.PMID 15699129.
  9. ^abcBarclay AN, Brown MH (June 2006). "The SIRP family of receptors and immune regulation".Nature Reviews. Immunology.6 (6):457–464.doi:10.1038/nri1859.PMID 16691243.S2CID 7915923.
  10. ^abvan Beek EM, Cochrane F, Barclay AN, van den Berg TK (December 2005)."Signal regulatory proteins in the immune system".Journal of Immunology.175 (12):7781–7787.doi:10.4049/jimmunol.175.12.7781.PMID 16339510.
  11. ^Weiskopf K, Ring AM, Ho CC, Volkmer JP, Levin AM, Volkmer AK, et al. (July 2013)."Engineered SIRPα variants as immunotherapeutic adjuvants to anticancer antibodies".Science.341 (6141):88–91.Bibcode:2013Sci...341...88W.doi:10.1126/science.1238856.PMC 3810306.PMID 23722425.
  12. ^Potential new cancer treatment activates cancer-engulfing cells. Feb 2017
  13. ^Yanagita T, Murata Y, Tanaka D, Motegi SI, Arai E, Daniwijaya EW, et al. (January 2017)."Anti-SIRPα antibodies as a potential new tool for cancer immunotherapy".JCI Insight.2 (1) e89140.doi:10.1172/jci.insight.89140.PMC 5214103.PMID 28097229.

Further reading

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This article incorporates text from theUnited States National Library of Medicine, which is in thepublic domain.

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