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SOCS2

From Wikipedia, the free encyclopedia
Protein-coding gene in the species Homo sapiens

SOCS2
Available structures
PDBOrtholog search:PDBeRCSB
List of PDB id codes

2C9W,4JGH,5BO4

Identifiers
AliasesSOCS2, CIS2, Cish2, SOCS-2, SSI-2, SSI2, STATI2, suppressor of cytokine signaling 2
External IDsOMIM:605117;MGI:1201787;HomoloGene:2880;GeneCards:SOCS2;OMA:SOCS2 - orthologs
Gene location (Human)
Chromosome 12 (human)
Chr.Chromosome 12 (human)[1]
Chromosome 12 (human)
Genomic location for SOCS2
Genomic location for SOCS2
Band12q22Start93,569,814bp[1]
End93,583,487bp[1]
Gene location (Mouse)
Chromosome 10 (mouse)
Chr.Chromosome 10 (mouse)[2]
Chromosome 10 (mouse)
Genomic location for SOCS2
Genomic location for SOCS2
Band10 C2|10 49.35 cMStart95,221,224bp[2]
End95,253,042bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • secondary oocyte

  • canal of the cervix

  • vena cava

  • body of uterus

  • myometrium

  • seminal vesicula

  • Epithelium of choroid plexus

  • ectocervix

  • prostate

  • Pituitary Gland
Top expressed in
  • cumulus cell

  • Ileal epithelium

  • olfactory epithelium

  • vestibular membrane of cochlear duct

  • left lung lobe

  • vestibular sensory epithelium

  • stria vascularis

  • Gonadal ridge

  • right lung

  • interventricular septum
More reference expression data
BioGPS


More reference expression data
Gene ontology
Molecular function
Cellular component
Biological process
Sources:Amigo /QuickGO
Orthologs
SpeciesHumanMouse
Entrez

8835

216233

Ensembl

ENSG00000120833

ENSMUSG00000020027

UniProt

O14508

O35717

RefSeq (mRNA)
NM_001270467
NM_001270468
NM_001270469
NM_001270470
NM_001270471

NM_003877

NM_001168655
NM_001168656
NM_001168657
NM_007706

RefSeq (protein)
NP_001257396
NP_001257397
NP_001257398
NP_001257399
NP_001257400

NP_003868

NP_001162126
NP_001162127
NP_001162128
NP_031732

Location (UCSC)Chr 12: 93.57 – 93.58 MbChr 10: 95.22 – 95.25 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

Suppressor of cytokine signaling 2 is aprotein that in humans is encoded by theSOCS2gene.[5][6][7]

This gene encodes a member of the STAT-induced STAT inhibitor (SSI), also known assuppressor of cytokine signalling (SOCS), family. SSI family members are cytokine-inducible negative regulators of cytokine signaling. The expression of this gene can be induced by a subset of cytokines, includingerythropoietin,GM-CSF,IL10 andinterferon-gamma (IFN-gamma). The protein encoded by this gene is found to interact with the cytoplasmic domain ofinsulin-like growth factor 1 receptor (IGF1R), and thus is thought to be involved in the regulation of IGF1R mediated cell signaling.[8]Knockout studies in mice also suggested a regulatory role of this gene in IGF-1 related growth control.[7][9]

Interactions

[edit]

SOCS2 has been shown tointeract withinsulin-like growth factor 1 receptor[8] anderythropoietin receptor.[10] Additionally, it acts as a substrate recognition subunit of aCullin5E3 ubiquitin ligase complex.[11] It is under investigation for use intargeted protein degradation.[12]

References

[edit]
  1. ^abcGRCh38: Ensembl release 89: ENSG00000120833Ensembl, May 2017
  2. ^abcGRCm38: Ensembl release 89: ENSMUSG00000020027Ensembl, May 2017
  3. ^"Human PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^"Mouse PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^Masuhara M, Sakamoto H, Matsumoto A, Suzuki R, Yasukawa H, Mitsui K, et al. (October 1997). "Cloning and characterization of novel CIS family genes".Biochemical and Biophysical Research Communications.239 (2):439–446.doi:10.1006/bbrc.1997.7484.PMID 9344848.
  6. ^Minamoto S, Ikegame K, Ueno K, Narazaki M, Naka T, Yamamoto H, et al. (August 1997). "Cloning and functional analysis of new members of STAT induced STAT inhibitor (SSI) family: SSI-2 and SSI-3".Biochemical and Biophysical Research Communications.237 (1):79–83.doi:10.1006/bbrc.1997.7080.PMID 9266833.
  7. ^ab"Entrez Gene: SOCS2 suppressor of cytokine signaling 2".
  8. ^abDey BR, Spence SL, Nissley P, Furlanetto RW (September 1998)."Interaction of human suppressor of cytokine signaling (SOCS)-2 with the insulin-like growth factor-I receptor".The Journal of Biological Chemistry.273 (37):24095–24101.doi:10.1074/jbc.273.37.24095.PMID 9727029.
  9. ^Greenhalgh CJ, Bertolino P, Asa SL, Metcalf D, Corbin JE, Adams TE, et al. (June 2002)."Growth enhancement in suppressor of cytokine signaling 2 (SOCS-2)-deficient mice is dependent on signal transducer and activator of transcription 5b (STAT5b)".Molecular Endocrinology.16 (6):1394–1406.doi:10.1210/mend.16.6.0845.PMID 12040024.
  10. ^Eyckerman S, Verhee A, der Heyden JV, Lemmens I, Ostade XV, Vandekerckhove J, Tavernier J (December 2001). "Design and application of a cytokine-receptor-based interaction trap".Nature Cell Biology.3 (12):1114–1119.doi:10.1038/ncb1201-1114.PMID 11781573.S2CID 10228882.
  11. ^Kung WW, Ramachandran S, Makukhin N, Bruno E, Ciulli A (June 2019)."Structural insights into substrate recognition by the SOCS2 E3 ubiquitin ligase".Nature Communications.10 (1): 2534.Bibcode:2019NatCo..10.2534K.doi:10.1038/s41467-019-10190-4.PMC 6557900.PMID 31182716.
  12. ^Ramachandran S, Makukhin N, Haubrich K, Nagala M, Forrester B, Lynch D, et al. (2022-10-18)."Structure-based design of a phosphotyrosine-masked covalent ligand targeting the E3 ligase SOCS2".Nature Communications.14 (1): 6345.doi:10.1038/s41467-023-41894-3.PMC 10564737.PMID 37816714.

Further reading

[edit]
PDB gallery
  • 2c9w: CRYSTAL STRUCTURE OF SOCS-2 IN COMPLEX WITH ELONGIN-B AND ELONGIN-C AT 1.9A RESOLUTION
    2c9w: CRYSTAL STRUCTURE OF SOCS-2 IN COMPLEX WITH ELONGIN-B AND ELONGIN-C AT 1.9A RESOLUTION

External links

[edit]
Ligand
Cytokine receptor
Janus kinase
Adaptor proteins
STAT
PIAS
SOCS
IRF
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