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Band 3 anion transport protein

From Wikipedia, the free encyclopedia
(Redirected fromSLC4A1)
Mammalian protein found in Homo sapiens
For the radio frequency range, seeBand III.

SLC4A1
Available structures
PDBOrtholog search:PDBeRCSB
List of PDB id codes

1BH7,1BNX,1BTQ,1BTR,1BTS,1BTT,1BZK,1HYN,3BTB,2BTA,2BTB,4KY9,4YZF

Identifiers
AliasesSLC4A1, solute carrier family 4 (anion exchanger), member 1 (Diego blood group), AE1, BND3, CD233, DI, EMPB3, EPB3, FR, RTA1A, SW, WD, WD1, WR, CHC, SAO, SPH4, solute carrier family 4 member 1 (Diego blood group)
External IDsOMIM:109270;MGI:109393;HomoloGene:133556;GeneCards:SLC4A1;OMA:SLC4A1 - orthologs
Gene location (Human)
Chromosome 17 (human)
Chr.Chromosome 17 (human)[1]
Chromosome 17 (human)
Genomic location for SLC4A1
Genomic location for SLC4A1
Band17q21.31Start44,248,390bp[1]
End44,268,141bp[1]
Gene location (Mouse)
Chromosome 11 (mouse)
Chr.Chromosome 11 (mouse)[2]
Chromosome 11 (mouse)
Genomic location for SLC4A1
Genomic location for SLC4A1
Band11 66.29 cM|11 DStart102,239,650bp[2]
End102,257,029bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • trabecular bone

  • bone marrow

  • bone marrow cell

  • renal medulla

  • blood

  • monocyte

  • kidney tubule

  • vena cava

  • glomerulus

  • human kidney
Top expressed in
  • fetal liver hematopoietic progenitor cell

  • blood

  • tibiofemoral joint

  • human fetus

  • internal carotid artery

  • body of femur

  • external carotid artery

  • yolk sac

  • endocardial cushion

  • spleen
More reference expression data
BioGPS
More reference expression data
Gene ontology
Molecular function
Cellular component
Biological process
Sources:Amigo /QuickGO
Orthologs
SpeciesHumanMouse
Entrez

6521

20533

Ensembl

ENSG00000004939

ENSMUSG00000006574

UniProt

P02730

P04919

RefSeq (mRNA)

NM_000342

NM_011403

RefSeq (protein)

NP_000333

NP_035533

Location (UCSC)Chr 17: 44.25 – 44.27 MbChr 11: 102.24 – 102.26 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

Band 3 anion transport protein, also known asanion exchanger 1 (AE1) orband 3 orsolute carrier family 4 member 1 (SLC4A1), is aprotein that is encoded by theSLC4A1gene in humans.

Band 3 anion transport protein is aphylogenetically-preservedtransport protein responsible for mediating theexchange ofchloride (Cl) withbicarbonate (HCO3) acrossplasma membranes. Functionally similar members of the AE clade areAE2 andAE3.[5]

Function

[edit]

Band 3 is present in the basolateral face of theα-intercalated cells of the collecting ducts of thenephron, which are the main acid-secreting cells of the kidney. They generatehydrogen ions and bicarbonate ions from carbon dioxide and water – a reaction catalysed bycarbonic anhydrase. The hydrogen ions are pumped into the collecting duct tubule byvacuolar H+ ATPase, the apicalproton pump, which thus excretes acid into theurine. kAE1, the kidney isoform of AE1, exchanges bicarbonate for chloride on the basolateral surface, essentially returning bicarbonate to the blood. Here it performs two functions:[citation needed]

  • Electroneutral chloride and bicarbonate exchange across the plasma membrane on a one-for-one basis. This is crucial for CO2 uptake by the red blood cell and conversion (by hydration catalysed bycarbonic anhydrase) into aproton and abicarbonate ion. The bicarbonate is then excreted (in exchange for a chloride) from the cell by band 3.
  • Physical linkage of the plasma membrane to the underlying membrane skeleton (via binding withankyrin andprotein 4.2). This appears to be to prevent membrane surface loss, rather than having to do with membrane skeleton assembly.

Distribution

[edit]

It is ubiquitous throughout thevertebrates. Inmammals, it is present in two specific sites:[citation needed]

Gene products

[edit]

The erythrocyte and kidney forms are differentisoforms of the sameprotein.[6]

The erythrocyte isoform of AE1, known as eAE1, is composed of 911 amino acids. eAE1 is an important structural component of the erythrocyte cell membrane, making up to 25% of the cell membrane surface. Each red cell contains approximately one million copies of eAE1.[citation needed]

The kidney isoform of AE1, known as kAE1 (which is 65 amino acids shorter than erythroid AE1) is found in thebasolateral membrane of alpha-intercalated cells in thecortical collecting duct of the kidney.[citation needed]

Clinical significance

[edit]

Mutations of kidney AE1 cause distal (type 1)renal tubular acidosis, which is an inability to acidify the urine, even if the blood is tooacidic. These mutations are disease causing as they cause mistargetting of the mutant band 3 proteins so that they are retained within the cell or occasionally addressed to the wrong (i.e. apical) surface.[citation needed]

Mutations of erythroid AE1 affecting the extracellular domains of the molecule may cause alterations in the individual's blood group, as band 3 determines theDiego antigen system (blood group).[citation needed]

More importantly erythroid AE1 mutations cause 15–25% of cases ofhereditary spherocytosis (a disorder associated with progressive red cell membrane loss), and also cause the hereditary conditions ofhereditary stomatocytosis[7] and Southeast Asianovalocytosis.[8]

Interactions

[edit]

Band 3 has been shown tointeract withCA2[9][10][11][12] andCA4.[13]

Discovery

[edit]

AE1 was discovered followingSDS-PAGE (sodium dodecyl sulfate polyacrylamide gel electrophoresis) of erythrocytecell membrane. The large 'third' band on the electrophoresis gel represented AE1, which was thus initially termed 'Band 3'.[14]

See also

[edit]

References

[edit]
  1. ^abcGRCh38: Ensembl release 89: ENSG00000004939Ensembl, May 2017
  2. ^abcGRCm38: Ensembl release 89: ENSMUSG00000006574Ensembl, May 2017
  3. ^"Human PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^"Mouse PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^Alper SL (2009)."Molecular physiology and genetics of Na+-independent SLC4 anion exchangers".Journal of Experimental Biology.212 (11):1672–1683.Bibcode:2009JExpB.212.1672A.doi:10.1242/jeb.029454.PMC 2683012.PMID 19448077.
  6. ^Schlüter K, Drenckhahn D (August 1986)."Co-clustering of denatured hemoglobin with band 3: its role in binding of autoantibodies against band 3 to abnormal and aged erythrocytes".Proc. Natl. Acad. Sci. U.S.A.83 (16):6137–41.Bibcode:1986PNAS...83.6137S.doi:10.1073/pnas.83.16.6137.PMC 386454.PMID 3461480.
  7. ^Bruce LJ, Robinson HC, Guizouarn H, Borgese F, Harrison P, King MJ, et al. (2005). "Monovalent cation leaks in human red cells caused by single amino-acid substitutions in the transport domain of the band 3 chloride-bicarbonate exchanger, AE1".Nat. Genet.37 (11):1258–63.doi:10.1038/ng1656.PMID 16227998.S2CID 23554234.
  8. ^Jarolim P, Palek J, Amato D, Hassan K, Sapak P, Nurse GT, et al. (1991)."Deletion in erythrocyte band 3 gene in malaria-resistant Southeast Asian ovalocytosis".Proc. Natl. Acad. Sci. U.S.A.88 (24):11022–6.Bibcode:1991PNAS...8811022J.doi:10.1073/pnas.88.24.11022.PMC 53065.PMID 1722314.
  9. ^Sterling D, Reithmeier RA, Casey JR (Dec 2001)."A transport metabolon. Functional interaction of carbonic anhydrase II and chloride/bicarbonate exchangers".J. Biol. Chem.276 (51):47886–94.doi:10.1074/jbc.M105959200.PMID 11606574.
  10. ^Vince JW, Reithmeier RA (October 1998)."Carbonic anhydrase II binds to the carboxyl terminus of human band 3, the erythrocyte C1-/HCO3- exchanger".J. Biol. Chem.273 (43):28430–7.doi:10.1074/jbc.273.43.28430.PMID 9774471.
  11. ^Vince JW, Carlsson U, Reithmeier RA (November 2000). "Localization of the Cl-/HCO3- anion exchanger binding site to the amino-terminal region of carbonic anhydrase II".Biochemistry.39 (44):13344–9.doi:10.1021/bi0015111.PMID 11063570.
  12. ^Vince JW, Reithmeier RA (May 2000). "Identification of the carbonic anhydrase II binding site in the Cl(-)/HCO(3)(-) anion exchanger AE1".Biochemistry.39 (18):5527–33.doi:10.1021/bi992564p.PMID 10820026.
  13. ^Sterling D, Alvarez BV, Casey JR (July 2002)."The extracellular component of a transport metabolon. Extracellular loop 4 of the human AE1 Cl-/HCO3- exchanger binds carbonic anhydrase IV".J. Biol. Chem.277 (28):25239–46.doi:10.1074/jbc.M202562200.PMID 11994299.
  14. ^Alberts B, Johnson A, Lewis J, Raff M, Roberts K, Walter P (2002).Molecular Biology of the Cell (Fourth ed.). Garland Science. p. 604.ISBN 0815332181.

Further reading

[edit]
  • Tanner MJ (1993). "Molecular and cellular biology of the erythrocyte anion exchanger (AE1)".Semin. Hematol.30 (1):34–57.PMID 8434259.
  • Chambers EJ, Askin D, Bloomberg GB, Ring SM, Tanner MJ (1998). "Studies on the structure of a transmembrane region and a cytoplasmic loop of the human red cell anion exchanger (band 3, AE1)".Biochem. Soc. Trans.26 (3):516–20.doi:10.1042/bst0260516.PMID 9765907.
  • Inaba M (2002). "[Band 3: expanding knowledge on its functions]".Seikagaku.73 (12):1431–5.PMID 11831035.
  • Tanner MJ (2002). "Band 3 anion exchanger and its involvement in erythrocyte and kidney disorders".Curr. Opin. Hematol.9 (2):133–9.doi:10.1097/00062752-200203000-00009.PMID 11844997.S2CID 30536102.
  • Shayakul C, Alper SL (2004). "Defects in processing and trafficking of the AE1 Cl/HCO3 exchanger associated with inherited distal renal tubular acidosis".Clin. Exp. Nephrol.8 (1):1–11.doi:10.1007/s10157-003-0271-x.PMID 15067510.S2CID 5671983.

External links

[edit]
PDB gallery
  • 1bh7: A LOW ENERGY STRUCTURE FOR THE FINAL CYTOPLASMIC LOOP OF BAND 3, NMR, MINIMIZED AVERAGE STRUCTURE
    1bh7: A LOW ENERGY STRUCTURE FOR THE FINAL CYTOPLASMIC LOOP OF BAND 3, NMR, MINIMIZED AVERAGE STRUCTURE
  • 1bzk: STRUCTURAL STUDIES ON THE EFFECTS OF THE DELETION IN THE RED CELL ANION EXCHANGER (BAND3, AE1) ASSOCIATED WITH SOUTH EAST ASIAN OVALOCYTOSIS.
    1bzk: STRUCTURAL STUDIES ON THE EFFECTS OF THE DELETION IN THE RED CELL ANION EXCHANGER (BAND3, AE1) ASSOCIATED WITH SOUTH EAST ASIAN OVALOCYTOSIS.
  • 1hyn: CRYSTAL STRUCTURE OF THE CYTOPLASMIC DOMAIN OF HUMAN ERYTHROCYTE BAND-3 PROTEIN
    1hyn: CRYSTAL STRUCTURE OF THE CYTOPLASMIC DOMAIN OF HUMAN ERYTHROCYTE BAND-3 PROTEIN
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