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Zinc transporter ZIP8

From Wikipedia, the free encyclopedia
(Redirected fromSLC39A8)
Protein found in humans

SLC39A8
Identifiers
AliasesSLC39A8, BIGM103, LZT-Hs6, ZIP8, PP3105, CDG2N, solute carrier family 39 member 8
External IDsOMIM:608732;MGI:1914797;HomoloGene:11155;GeneCards:SLC39A8;OMA:SLC39A8 - orthologs
Gene location (Human)
Chromosome 4 (human)
Chr.Chromosome 4 (human)[1]
Chromosome 4 (human)
Genomic location for SLC39A8
Genomic location for SLC39A8
Band4q24Start102,251,080bp[1]
End102,431,258bp[1]
Gene location (Mouse)
Chromosome 3 (mouse)
Chr.Chromosome 3 (mouse)[2]
Chromosome 3 (mouse)
Genomic location for SLC39A8
Genomic location for SLC39A8
Band3 G3|3 63.04 cMStart135,531,040bp[2]
End135,594,333bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • parotid gland

  • lower lobe of lung

  • visceral pleura

  • germinal epithelium

  • upper lobe of lung

  • parietal pleura

  • upper lobe of left lung

  • right lung

  • mucosa of sigmoid colon

  • rectum
Top expressed in
  • molar

  • right lung lobe

  • left lung

  • left lung lobe

  • hair follicle

  • conjunctival fornix

  • yolk sac

  • umbilical cord

  • primitive streak

  • fetal liver hematopoietic progenitor cell
More reference expression data
BioGPS
n/a
Gene ontology
Molecular function
Cellular component
Biological process
Sources:Amigo /QuickGO
Orthologs
SpeciesHumanMouse
Entrez

64116

67547

Ensembl

ENSG00000138821

ENSMUSG00000053897

UniProt

Q9C0K1

Q91W10

RefSeq (mRNA)

NM_001135146
NM_001135147
NM_001135148
NM_022154

NM_001135149
NM_001135150
NM_026228

RefSeq (protein)

NP_001128618
NP_001128619
NP_001128620
NP_071437

NP_001128621
NP_001128622
NP_080504

Location (UCSC)Chr 4: 102.25 – 102.43 MbChr 3: 135.53 – 135.59 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

Zinc transporter ZIP8 is acation/bicarbonatesymporterprotein which in humans is encoded by theSLC39A8gene.[5][6][7]

Function

[edit]

Thistransmembrane protein is responsible for theinflux ofzinc,manganese,iron, andcadmium.[8] ZIP8 is distributed among theembryo,placenta, andyolk sac during development.[9] Within the embryo, the concentration of ZIP8 is highest during the developmental period of different organ systems, specifically the heart where is it localized in theendothelial cells.Cardiac development is a zinc-dependent event. Beginning around mouse E8.0, the heart is in a tubular form with an outermyocardium layer and an innerendocardium layer, separated by cardiac jelly.[10] As development continues, trabeculation, theprotrusion ofcardiomyocytes into the cardiac jelly, begins and facilitates nutrient and oxygen exchange prior to the establishment ofcoronary vessels. Simultaneous with coronary circulation development, thetrabeculae then collapse into the ventricular wall in a process known ascompaction.Cardiomyocyte differentiation,proliferation, and trabeculae patterning is regulated throughNotch 1signaling, which is upregulated by the ECM.ADAMTS1,5,7, 15, and 19 are zincmetalloenzymes responsible for degrading the ECM prior to compaction.[11] Many studies have analyzed the effects of Slc39a8-/- on fetal heart development and have shown a decrease inzinc influx leading to an increase incardiomyocyte proliferation throughBMP10, hypertrabeculation through the upregulation of Notch1, and ventricular non-compaction due to the persistence of the ECM.

References

[edit]
  1. ^abcGRCh38: Ensembl release 89: ENSG00000138821Ensembl, May 2017
  2. ^abcGRCm38: Ensembl release 89: ENSMUSG00000053897Ensembl, May 2017
  3. ^"Human PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^"Mouse PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^"SLC39A8 solute carrier family 39 member 8 [Homo sapiens (human)] – Gene – NCBI".www.ncbi.nlm.nih.gov.National Center for Biotechnology Information,U.S. National Library of Medicine. Retrieved19 April 2019.
  6. ^Park JH, Hogrebe M, Grüneberg M."SLC39A8 deficiency is a novel treatable disorder of manganese metabolism and glycosylation".ResearchGate. Retrieved19 April 2019.
  7. ^Gálvez-Peralta M, He L, Jorge-Nebert LF, Wang B, Miller ML, Eppert BL, Afton S, Nebert DW (2012)."ZIP8 zinc transporter: indispensable role for both multiple-organ organogenesis and hematopoiesis in utero".PLOS ONE.7 (5) e36055.Bibcode:2012PLoSO...736055G.doi:10.1371/journal.pone.0036055.PMC 3341399.PMID 22563477.
  8. ^Wang B, He L, Dong H, Dalton TP, Nebert DW (July 2011)."Generation of a Slc39a8 hypomorph mouse: markedly decreased ZIP8 Zn2+/(HCO3)2 transporter expression".Biochemical and Biophysical Research Communications.410 (2):289–94.doi:10.1016/j.bbrc.2011.05.134.PMC 3136049.PMID 21658371.
  9. ^Chen J, Gálvez-Peralta M, Zhang X, Deng J, Liu Z, Nebert DW (July 2018)."In utero gene expression in the Slc39a8(neo/neo) knockdown mouse".Scientific Reports.8 (1): 10703.Bibcode:2018NatSR...810703C.doi:10.1038/s41598-018-29109-y.PMC 6048144.PMID 30013175.
  10. ^Lin W, Li D (June 2018). "Zinc and Zinc Transporters: Novel Regulators of Ventricular Myocardial Development".Pediatric Cardiology.39 (5):1042–1051.doi:10.1007/s00246-018-1859-y.PMID 29536133.S2CID 3861584.
  11. ^Lin W, Li D, Cheng L, Li L, Liu F, Hand NJ, Epstein JA, Rader DJ (February 2018)."Zinc transporter Slc39a8 is essential for cardiac ventricular compaction".The Journal of Clinical Investigation.128 (2):826–833.doi:10.1172/JCI96993.PMC 5785267.PMID 29337306.
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