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SLC22A4

From Wikipedia, the free encyclopedia
Protein-coding gene in humans

SLC22A4
Identifiers
AliasesSLC22A4, OCTN1, solute carrier family 22 member 4, DFNB60
External IDsOMIM:604190;MGI:1353479;HomoloGene:81701;GeneCards:SLC22A4;OMA:SLC22A4 - orthologs
Gene location (Human)
Chromosome 5 (human)
Chr.Chromosome 5 (human)[1]
Chromosome 5 (human)
Genomic location for SLC22A4
Genomic location for SLC22A4
Band5q31.1Start132,294,394bp[1]
End132,344,190bp[1]
Gene location (Mouse)
Chromosome 11 (mouse)
Chr.Chromosome 11 (mouse)[2]
Chromosome 11 (mouse)
Genomic location for SLC22A4
Genomic location for SLC22A4
Band11 B1.3|11 32.07 cMStart53,873,949bp[2]
End53,918,916bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • bronchial epithelial cell

  • mucosa of paranasal sinus

  • right uterine tube

  • trabecular bone

  • nasal epithelium

  • blood

  • olfactory zone of nasal mucosa

  • bone marrow

  • epithelium of nasopharynx

  • monocyte
Top expressed in
  • right kidney

  • lumbar subsegment of spinal cord

  • proximal tubule

  • fetal liver hematopoietic progenitor cell

  • granulocyte

  • lip

  • skin of external ear

  • human kidney

  • cerebellar cortex

  • jejunum
More reference expression data
BioGPS
More reference expression data
Gene ontology
Molecular function
Cellular component
Biological process
Sources:Amigo /QuickGO
Orthologs
SpeciesHumanMouse
Entrez

6583

30805

Ensembl

ENSG00000197208

ENSMUSG00000020334

UniProt

Q9H015

Q9Z306

RefSeq (mRNA)

NM_003059

NM_019687
NM_001330304

RefSeq (protein)

NP_003050

NP_001317233
NP_062661

Location (UCSC)Chr 5: 132.29 – 132.34 MbChr 11: 53.87 – 53.92 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

Solute carrier family 22, member 4, also known asSLC22A4, is a humangene; the encoded protein is known as theergothioneine transporter.[5][6]

Function

[edit]

The encoded protein is an integral protein of the plasma membrane containing 12 transmembrane segments. The first functional designation of this protein was OCTN1 ("organic cation transporter, novel, type 1"), but efficiency of transport for organic cations (e.g.,tetraethylammonium) is very low. The transport efficiency for carnitine is also negligible. Instead, the protein is responsible for thecotransport of sodium ions andergothioneine, which is anantioxidant, into cells.[7] Thus, a more appropriate functional designation is ETT ("ergothioneine transporter").[5]

Interactions

[edit]

SLC22A4 has been shown tointeract withPDZK1.[8]

See also

[edit]

References

[edit]
  1. ^abcGRCh38: Ensembl release 89: ENSG00000197208Ensembl, May 2017
  2. ^abcGRCm38: Ensembl release 89: ENSMUSG00000020334Ensembl, May 2017
  3. ^"Human PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^"Mouse PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^abGründemann D, Hartmann L, Flögel S (May 2022). "The ergothioneine transporter (ETT): substrates and locations, an inventory".FEBS Letters.596 (10):1252–1269.doi:10.1002/1873-3468.14269.PMID 34958679.S2CID 245535600.
  6. ^"Entrez Gene: SLC22A4 solute carrier family 22 (ergothioneine transporter), member 4".
  7. ^Gründemann D, Harlfinger S, Golz S, Geerts A, Lazar A, Berkels R, et al. (Apr 2005)."Discovery of the ergothioneine transporter".Proceedings of the National Academy of Sciences of the United States of America.102 (14):5256–5261.Bibcode:2005PNAS..102.5256G.doi:10.1073/pnas.0408624102.PMC 555966.PMID 15795384.
  8. ^Gisler SM, Pribanic S, Bacic D, Forrer P, Gantenbein A, Sabourin LA, et al. (Nov 2003)."PDZK1: I. a major scaffolder in brush borders of proximal tubular cells".Kidney International.64 (5):1733–1745.doi:10.1046/j.1523-1755.2003.00266.x.PMID 14531806.

Further reading

[edit]

This article incorporates text from theUnited States National Library of Medicine, which is in thepublic domain.

By group
SLC1–10
(1):
(2):
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(4):
(5):
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SLC11–20
(11):
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SLC21–30
(21):
(22):
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SLC31–40
(31):
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SLC41–48
(41):
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(48):
SLCO1–4
Symporter,Cotransporter
Antiporter (exchanger)


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