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Syntenin-2

From Wikipedia, the free encyclopedia
(Redirected fromSDCBP2)
Protein found in humans
SDCBP2
Identifiers
AliasesSDCBP2, SITAC, SITAC18, ST-2, syndecan binding protein 2, ST2
External IDsOMIM:617358;MGI:2385156;HomoloGene:9240;GeneCards:SDCBP2;OMA:SDCBP2 - orthologs
Gene location (Human)
Chromosome 20 (human)
Chr.Chromosome 20 (human)[1]
Chromosome 20 (human)
Genomic location for SDCBP2
Genomic location for SDCBP2
Band20p13Start1,309,909bp[1]
End1,329,139bp[1]
Gene location (Mouse)
Chromosome 2 (mouse)
Chr.Chromosome 2 (mouse)[2]
Chromosome 2 (mouse)
Genomic location for SDCBP2
Genomic location for SDCBP2
Band2|2 G3Start151,414,542bp[2]
End151,431,925bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • mucosa of ileum

  • mucosa of transverse colon

  • jejunal mucosa

  • mucosa of sigmoid colon

  • pancreatic ductal cell

  • rectum

  • nasal epithelium

  • gallbladder

  • skin of leg

  • duodenum
Top expressed in
  • mucous cell of stomach

  • pyloric antrum

  • epithelium of stomach

  • duodenum

  • intestinal villus

  • esophagus

  • jejunum

  • left colon

  • lip

  • ileum
More reference expression data
BioGPS
n/a
Gene ontology
Molecular function
Cellular component
Biological process
Sources:Amigo /QuickGO
Orthologs
SpeciesHumanMouse
Entrez

27111

228765

Ensembl

ENSG00000125775

ENSMUSG00000027456

UniProt

Q9H190

Q99JZ0

RefSeq (mRNA)

NM_080489
NM_001199784
NM_015685

NM_145535

RefSeq (protein)

NP_001186713
NP_056500
NP_536737

NP_663510

Location (UCSC)Chr 20: 1.31 – 1.33 MbChr 2: 151.41 – 151.43 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

Syntenin-2 is aprotein that in humans is encoded by theSDCBP2gene.[5][6]

References

[edit]
  1. ^abcGRCh38: Ensembl release 89: ENSG00000125775 –Ensembl, May 2017
  2. ^abcGRCm38: Ensembl release 89: ENSMUSG00000027456 –Ensembl, May 2017
  3. ^"Human PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^"Mouse PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^Koroll M, Rathjen FG, Volkmer H (Apr 2001)."The neural cell recognition molecule neurofascin interacts with syntenin-1 but not with syntenin-2, both of which reveal self-associating activity".J Biol Chem.276 (14):10646–54.doi:10.1074/jbc.M010647200.PMID 11152476.
  6. ^"Entrez Gene: SDCBP2 syndecan binding protein (syntenin) 2".

Further reading

[edit]


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