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Peptoniphilaceae

From Wikipedia, the free encyclopedia
Family of bacteria

Peptoniphilaceae
Scientific classificationEdit this classification
Domain:Bacteria
Kingdom:Bacillati
Phylum:Bacillota
Class:Clostridia
Order:Tissierellales
Family:Peptoniphilaceae
Johnson et al. 2014[1]
Genera

See text

ThePeptoniphilaceae are a family ofbacteria in the classClostridia.

Taxonomy

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Not validly published genera in Peptoniphilaceae.

  • Khoudiadiopia, with the type speciesK. massiliensis. Proposed in 2017, but not validly published.
  • Lagierella, with the type speciesL. massiliensis. The genus has been proposed twice, in 2016 and 2021, based on the same isolate.
  • Micromonas, first proposed in 1981 with the speciesMicromonas pusilla, but not validly published. Again proposed in 2000 with the new combinationMicromonas micros as type species, but ruled illegitimate due to the algal genusMicromonas.M. micros is now validly published asParvimonas micra.
  • Schleiferella, proposed in 2001 as genus for several new combinations, all of which are now validly published inPeptoniphilus.
  • Urinacoccus andUrinicoccus, with the type speciesU. massiliensis. The genus has been proposed twice, in 2016 and 2019, based on the same isolate.

Phylogeny

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The currently accepted taxonomy is based on theList of Prokaryotic names with Standing in Nomenclature (LPSN)[1] andNational Center for Biotechnology Information (NCBI)[2]

16S rRNA basedLTP_10_2024[3][4][5]120 marker proteins basedGTDB 09-RS220[6][7][8]
Peptoniphilaceae

FenollariaPagnier et al. 2018

EzakiellaPatel et al. 2015

"Neofamilia"Lagier et al. 2016

"Urinicoccus"Yimagou et al. 2019

AedoeadaptatusHitch et al. 2022

PeptoniphilusEzaki et al. 2001

ParvimonasTindall & Euzéby 2006

FinegoldiaMurdoch & Shah 2000

GallicolaEzaki et al. 2001

MediannikoviicoccusLy et al. 2023

Miniphocaeibactercorrig. Bilen et al. 2021

HelcococcusCollins et al. 1993

"Ndongobacter"Brahimi et al. 2017

"Khoudiadiopia"Diop et al. 2017

KallipygaHugon et al. 2016

MurdochiellaUlger-Toprak et al. 2010

AnaerococcusEzaki et al. 2001

See also

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References

[edit]
  1. ^abA.C. Parte; et al."Peptoniphilaceae".List of Prokaryotic names with Standing in Nomenclature (LPSN). Retrieved2023-09-09.
  2. ^Sayers; et al."Peptoniphilaceae".National Center for Biotechnology Information (NCBI) taxonomy database. Retrieved2023-09-09.
  3. ^"The LTP". Retrieved10 December 2024.
  4. ^"LTP_all tree in newick format". Retrieved10 December 2024.
  5. ^"LTP_10_2024 Release Notes"(PDF). Retrieved10 December 2024.
  6. ^"GTDB release 09-RS220".Genome Taxonomy Database. Retrieved10 May 2024.
  7. ^"bac120_r220.sp_labels".Genome Taxonomy Database. Retrieved10 May 2024.
  8. ^"Taxon History".Genome Taxonomy Database. Retrieved10 May 2024.
Prokaryotes:Bacteria classification
Terrabacteria
BV1, BV3, BV5
others
Cyanoprokaryota
Firmicutes
BV3
Low GC
  • Bacillota
  • Bacillota A
    • "Clostridiia"
    • "Thermoanaerobacteria"
    • Thermosediminibacteria
  • Bacillota D
  • Bacillota E
    • Sulfobacillia
    • Symbiobacteriia
    • Thermaerobacteria
  • Bacillota G
    • "Hydrogenisporia"
    • Limnochordia
  • "Desulfotomaculota"
    • "Carboxydocellia"
    • "Carboxydothermia"
    • "Dehalobacteriia"
    • Desulfitobacteriia
    • Desulfotomaculia
    • "Moorellia"
    • Peptococcia
    • Syntrophomonadia
    • Thermincolia
  • "Halanaerobiaeota"
  • "Selenobacteria"
CPR group
Thermotogida
Synergistetes
Thermocalda
Fusobacterida
Hydrobacteria
BV2, BV4
Clade 1
Spirochaeto
bacteriobiontes
PVC group
(Planctobacteria)
FCB group
(Sphingobacteria)
Proteobacteria
BV2
Aquificida
Deltaproteobacteria
others
others
Peptoniphilaceae
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