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Palpitomonas

From Wikipedia, the free encyclopedia
Genus of protists
Palpitomonas
Scientific classificationEdit this classification
Domain:Eukaryota
Clade:Pancryptista
Phylum:Cryptista
Subphylum:Palpitia
Class:Palpitea
Order:Palpitida
Family:Palpitomonadidae
Cavalier-Smith, 2012
Genus:Palpitomonas
Yabuki and Ishida, 2010
Species:
P. bilix
Binomial name
Palpitomonas bilix
Yabuki and Ishida, 2010

Palpitomonas is a genus of biflagellatedprotists within the phylumCryptista, a clade of basaleukaryotes. This genus is especially significant for understanding the earlyevolution of mitochondria,flagella, and the broadercryptist lineage.Palpitomonas is a key model organism for studying the phylogenetic origins ofmitochondria and eukaryotic motility structures, such asflagella. One of the most common species in the genus ofPalpitomonas isPalpitomonas bilix, which has been used in genomic and phylogenetic studies due to its specialmitochondrial genome structure and basal phylogenetic position.[1][2][3]

Introduction

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Palpitomonas is an importantorganism for research on the origins ofeukaryotic life.Palpitomonasbilix have some unique characteristics that are rare in the othereukaryotes, characterized by its small size, biflagellate structure, and unique mitochondrial. The genusPalpitomonas belongs toCryptista, which includes other simpleeukaryotic organisms likecryptophytes andkatablepharids. As abacterivorePalpitomonas plays an ecological role in regulatingmicrobial populations andnutrient cycling inmarine ecosystems by feeding onbacteria and become a prey forlarger microorganism[1][2][3]

Taxonomy and classification

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The genusPalpitomonas is part of theCryptista phylum, which itself is situated within theDiaphoretickes supergroup.Cryptista is a basal group ofeukaryotes whose members are primarily aquatic andflagellated. The phylumCryptista, as part ofDiaphoretickes, shares a common ancestor with otherearly-diverging eukaryotic groups, including theArchaeplastida and theSAR supergroup (Stramenopiles,Alveolata,Rhizaria). Classification ofPalpitomonas has evolved over time as molecular phylogenetic has revealed its position as one of the earliest-divergingeukaryotic lineages, particularly among theflagellated protists.[1]

The genusPalpitomonas is closely related to other genera ofCryptista, including thekathablepharids andcryptophytes, but its specific evolutionary path remains an area of ongoing study.Molecular phylogenetic analyses, particularly those involvingribosomal RNA (rRNA) sequences andprotein-coding genes, have demonstrated thatPalpitomonas is a basal lineage withinCryptista, with close related to the early-diverging mitochondrial ancestors of other eukaryotes.[1][2][3]

Phylogenetic position

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Phylogenetic analyses based on multigene datasets have shownPalpitomonasbilix as basal within theCryptista clade, diverging beforecryptophytes andkatablepharids. Its unique position in theeukaryotic tree makes it instrumental for studying the divergence ofeukaryotic lineages.Palpitomonas is also part of broader studies that question themonophyly ofHacrobia, suggesting complexevolutionary relationships among early-divergingprotists.Phylogenetic studies with 157-gene alignments have reinforced its position as a basalcryptist, adding clarity to its relationship with otherprotists such ascryptophytes.[1][3]

Electron micrographs ofPalpitomonas bilix gen. et sp. nov.N, nucleus;ER, endoplasmic reticulum;Mt, mitochondrion;G, Golgi apparatus;B, basal body;FV, food vacuole.[3]

Morphology

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Palpitomonasbilix, the primary species in this genus, has a distinctivemorphology.Cells are small approximately 3-8micrometer with unique structure with two lateral flagella that different in function and position. Theanterior flagellum is highly active but theposterior flagellum trails passively, helping the organism's characteristic "wobbling" motion. This biflagellate structure is significant for movement and feeding. Each cell is vacuolated with nocell wall allowing for flexibility. Themitochondria ofPalpitomonas containflat cristae, similar to those found in othercryptists, although distinct from the tubularcristae ofKatablepharida.[1][4]

Ultrastructural analysis shows a singlemitochondrion with lobed extensions and anendoplasmic reticulum surrounding thenucleus. AGolgi apparatus is located between thenucleus andflagella, and two microtubular roots support the basal bodies. Theanterior flagellum ofPalpitomonas possessesmastigonemes—bipartite hair-like structures that aid in movement and feeding by creating a current that draws in food particles.Electron microscopy has shown thatPalpitomonas doesn't hasejectosomes an organelle used for rapid ejection ofcell contents, which is present incryptophytes but absent inkatablepharids andPalpitomonas. This lack ofejectosomes and other features further distinguishesPalpitomonas from othercryptists.[1][4]

Electron micrographs ofPalpitomonas bilix gen. et sp. nov.[3]

Mitochondrial genome and cytochrome c maturation

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Palpitomonasbilix has a distinctivemitochondrial genome, organized as alinear DNA molecule with large inverted repeats at both ends. Thislinear mitochondrial genome structure, unusual amongeukaryotes, is thought to have evolved independently in several lineages. It contains genes related tocytochrome c maturation (System I), a system inherited frombacterial ancestors. While relatedcryptists such ascryptophytes andkathablepharids utilize a differentcytochrome c maturation system (System III),Palpitomonas retains the ancestral System I, making it an important model for studyingmitochondrial evolution in eukaryotes.[2][1]

Ecological role

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Palpitomonas play anecological role inmarine environment, as abacterivore by consumingbacteria provide the regulation ofbacterial populations and helping innutrient cycling withinmicrobial communities. As well as its role as prey forlarger microorganisms, ecologicallyPalpitomonas importance in maintainingecosystem balance inmarine environment.[1]

Evolutionary role

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The combination of basal features inPalpitomonas, such as its linearmitochondrial genome andancestral cytochrome c maturation system, make it an important organism for understandingevolutionary ineukaryotes. Position withinCryptista andHacrobia and its early diverging lineage provide insights into the development ofmitochondria, cellular structures, and othereukaryotic traits.[4][1][2]

History

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Palpitomonasbilix was first described in 2010 by Yabuki et al. after being isolated frommarine environments nearPalau. Observations of its ultrastructure andphylogenetic analyses based on multiple genes led to its classification as a novel genus withinCryptista. This discovery provided new insights intoearly eukaryotic diversity and clarified theevolutionary links betweenCryptista and other early-diverging groups.Palpitomonas remains valuable for studying the diversity ofearly eukaryotic cells.[2][4]

Structure

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Palpitomonas has severalvacuoles and anextensive endoplasmic reticulum that surroundingnucleus. Itsmitochondria have lobed shape, and theGolgi apparatus located near theflagella processesproteins. Theflagellum that moves actively is covered with small hair-like structures calledmastigonemes. Unlike othercryptists,P. bilix does not possessejectosomes, the ejective organelles characteristic ofcryptophytes and somekathablepharids.[4][2]

Life cycle

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Palpitomonasreproduces asexually (binary fission) by dividing into two cell. This simple method ofreproduction allows Palpitomonas populations to grow quickly in favorable conditions. Unlike othereukaryotes,Palpitomonas does notreproduce sexually, which limits its genetic diversity. However, this basiclife cycle reflects its ancient place ineukaryotic history and shares similarities with other early-divergingeukaryotes.[2]

References

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  1. ^abcdefghijYabuki, Akinori; Kamikawa, Ryoma; Ishikawa, Sohta A.; Kolisko, Martin; Kim, Eunsoo; Tanabe, Akifumi S.; Kume, Keitaro; Ishida, Ken-ichiro; Inagki, Yuji (2014-04-10)."Palpitomonas bilix represents a basal cryptist lineage: insight into the character evolution in Cryptista".Scientific Reports.4 (1): 4641.Bibcode:2014NatSR...4.4641Y.doi:10.1038/srep04641.ISSN 2045-2322.PMC 3982174.PMID 24717814.
  2. ^abcdefghNishimura, Yuki; Tanifuji, Goro; Kamikawa, Ryoma; Yabuki, Akinori; Hashimoto, Tetsuo; Inagaki, Yuji (2016)."Mitochondrial Genome ofPalpitomonas bilix: Derived Genome Structure and Ancestral System for Cytochromec Maturation".Genome Biology and Evolution.8 (10):3090–3098.doi:10.1093/gbe/evw217.PMC 5174734.PMID 27604877. Retrieved2024-11-12.
  3. ^abcdefYabuki, Akinori; Inagaki, Yuji; Ishida, Ken-ichiro (2010-10-01)."Palpitomonas bilix gen. et sp. nov.: A Novel Deep-branching Heterotroph Possibly Related to Archaeplastida or Hacrobia".Protist.161 (4):523–538.doi:10.1016/j.protis.2010.03.001.ISSN 1434-4610.PMID 20418156.
  4. ^abcdeKim, Jong Im; Yoon, Hwan Su; Yi, Gangman; Shin, Woongghi; Archibald, John M. (2018-04-20)."Comparative mitochondrial genomics of cryptophyte algae: gene shuffling and dynamic mobile genetic elements".BMC Genomics.19 (1): 275.doi:10.1186/s12864-018-4626-9.ISSN 1471-2164.PMC 5910586.PMID 29678149.
Eukaryote classification
Amoebozoa
Holomycota
Filozoa
Choanozoa
Haptista
    SAR    
Rhizaria
Alveolata
Myzozoa
Stramenopiles
Bigyra*
Gyrista
Pancryptista
Cryptista
Archaeplastida
(plantssensu lato)
Viridiplantae
(green plants or
plantssensu stricto)
Streptophyta
Discoba
Discicristata
Metamonada*
Malawimonadida
Provora
Hemimastigophora
Ancyromonadida
CRuMs
Genera of
uncertain affiliation
Acritarchs
and other fossils
Palpitomonas
Palpitomonas bilix
Palpitomonadidae
Palpitida
Palpitea
Palpitia
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