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Paenibacillaceae

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Family of bacteria

Paenibacillaceae

A colony generated by the Branching (Tip splitting) morphotype bacteria ofPaenibacillus dendritiformis.
Scientific classification
Domain:	Bacteria
Kingdom:	Bacillati
Phylum:	Bacillota
Class:	Bacilli
Order:	Bacillales
Family:	Paenibacillaceae Garrityet al. 2001
Genera^[1]
See text
Synonyms
"Astasioideae"Meyer 1897 "Astasiinae"corrig. Pribram 1929

ThePaenibacillaceae are afamily ofGram-positive bacteria.^[1]^[2]

Phylogeny

[edit]

The currently accepted taxonomy is based on theList of Prokaryotic names with Standing in Nomenclature (LPSN)^[1] andNational Center for Biotechnology Information (NCBI).^[3]

16S rRNA basedLTP_10_2024^[4]^[5]^[6]

120 marker proteins basedGTDB 09-RS220^[7]^[8]^[9]

Oxalophagaceae

	OxalophagusCollins et al. 1994

	AmmoniphilusZaitsev et al. 1998

Aneurinibacillales

Aneurinibacillaceae	AneurinibacillusShida et al. 1996

Brevibacillales

Brevibacillaceae	BrevibacillusShida et al. 1996

Paenibacillales

AmmoniibacillusSakai et al. 2015

ThermobacillusTouzel et al. 2000

Insulibactercorrig. Chhe et al. 2023

	Paenibacillus turpanensisYang et al. 2021

	XylanibacillusKukolya et al. 2018

Paenibacillus~1

	SaccharibacillusRivas et al. 2008

	CohnellaKämpfer et al. 2006

Paenibacillus~2

	LongirhabdusChen et al. 2019

	ChengkuizengellaCao et al. 2017

Paenibacillus~3

Paenibacillus~4

Paenibacillus cymbidiiSun et al. 2019

GorillibacteriumKeita et al. 2017

	Paenibacillus aurantiusHwang et al. 2024

	PaludirhabdusHwanget al. 2018

Paenibacillus~5

Paenibacillus larvae(White 1906) Ash, Priest & Collins 1994

Paenibacillus~6

Paenibacillus sediminisWang et al. 2012

	Paenibacillus cisolokensisYokota et al. 2016

	MarinicrinisGuo et al. 2016

Paenibacillus~7

Paenibacillus~8

Paenibacillus~9

Paenibacillus~10

	Paenibacillus qingshengiiChen et al. 2015

	FontibacillusSaha et al. 2010

PaenibacillusAsh, Priest & Collins 1994

Paenibacillaceae

Paenibacillales

"Reconciliibacillaceae"

	Paenibacillus thermoaerophilusUeda, Yamamoto & Kurosawa 2013

	"Ca.Reconciliibacillus"Kolinko et al. 2019

"Xylanibacillaceae"	Xylanibacillus

DA‑C8

Insulibacter

"Longirhabdaceae"

	Longirhabdus

	Chengkuizengella

YIM‑B00363	Paenibacillus_AK & AE

"Gorillibacteriaceae"

Paenibacillus_AA & AB

Paenibacillus_V, AN & AC

	Paenibacillus_L

	Gorillibacterium

Paenibacillus_AF, S, G, AM, H, F, AL, AI & E

DY6

Paenibacillus swuensisLee et al. 2015

Paenibacillaceae

Cohnella

Thermobacillus

Paenibacillus_J & D

Paenibacillus cisolokensis

Paenibacillus_Z

Paenibacillus_T

	Paenibacillus_O

	"Ca.Pristimantibacillus"Díaz Rodríguez et al. 2022

Paenibacillus_K

Paenibacillus_B

	Paenibacillus_J

	Saccharibacillus

	Paenibacillus sediminis

	Fontibacillus

Paenibacillus, AG & A

DSM‑22679	Microaerobacter {DSM-22679}

Aneurinibacillales

"Ammoniphilaceae"	Ammoniphilus

Aneurinibacillaceae	Aneurinibacillus

Brevibacillales

Brevibacillaceae	Brevibacillus

other

Unassigned genera:

"Ferviditalea"Chen et al. 2024
Gordoniibacilluscorrig. Kudryashova et al. 2024

References

[edit]

^^a ^b ^cA.C. Parte; et al."Paenibacillaceae".List of Prokaryotic names with Standing in Nomenclature (LPSN). Retrieved2025-02-28.
^George M. Garrity; Vos, P.; Garrity, G.; Jones, D.; Krieg, N.R.; Ludwig, W.; Rainey, F.A.; Schleifer, K.-H.; Whitman, W.B. (September 15, 2009).The Firmicutes. Bergey's Manual of Systematic Bacteriology. Vol. 3 (2nd ed.). New York: Springer. p. 1450.ISBN 978-0-387-95041-9. British Library no. GBA561951.
^C.L. Schoch; et al."Paenibacillaceae".National Center for Biotechnology Information (NCBI) taxonomy database. Retrieved2025-02-28.
^"The LTP". Retrieved10 December 2024.
^"LTP_all tree in newick format". Retrieved10 December 2024.
^"LTP_10_2024 Release Notes"(PDF). Retrieved10 December 2024.
^"GTDB release 09-RS220".Genome Taxonomy Database. Retrieved10 May 2024.
^"bac120_r220.sp_labels".Genome Taxonomy Database. Retrieved10 May 2024.
^"Taxon History".Genome Taxonomy Database. Retrieved10 May 2024.

Prokaryotes:Bacteria classification

(major groups

Terrabacteria
BV1, BV3, BV5

others	Actinomycetota Acidimicrobiia Actinomycetia "Aquicultoria" Coriobacteriia "Geothermincolia" "Humimicrobiia" Nitriliruptoria Rubrobacteria Thermoleophilia Armatimonadota "Abditibacteriia" Armatimonadia Chthonomonadia Fimbriimonadia "Heboniibacteriia" "Zipacnadia" "Bipolaricaulota" "Bipolaricaulia" Chloroflexota "Caldilineia" Chloroflexia Dehalococcoidia Ktedonobacteria "Limnocylindria" Deinococcota "Deinococcia" "Dormiibacterota" "Dormibacteria" "Sysuimicrobiota" "Sysuimicrobiia" Vulcanimicrobiota "Eudoremicrobiia" Vulcanimicrobiia "Xenobiia"
Cyanoprokaryota	Cyanobacteriota Cyanobacteria "Sericytochromatia" "Vampirovibrionophyceae" "Margulisiibacteriota" "Marinamargulisbacteria" "Riflemargulisbacteria" "Saganbacteria" "Termititenacia"
Firmicutes BV3 Low GC	Bacillota "Bacillia" Bacillota A "Clostridiia" "Thermoanaerobacteria" Thermosediminibacteria Bacillota D "Dethiobacteria" Natranaerobiia "Proteinivoracia" Bacillota E Sulfobacillia Symbiobacteriia Thermaerobacteria Bacillota G "Hydrogenisporia" Limnochordia "Desulfotomaculota" "Carboxydocellia" "Carboxydothermia" "Dehalobacteriia" Desulfitobacteriia Desulfotomaculia "Moorellia" Peptococcia Syntrophomonadia Thermincolia "Halanaerobiaeota" "Halanaerobiia" "Selenobacteria" "Selenomonadia"

CPR group

"Elulota"
- "Elulimicrobia"
"Patescibacteria"
- ABY1
- "Absconditabacteria"
- "Andersenbacteria"
- "Berkelbacteria"
- "Dojkabacteria"
- "Doudnabacteria"
- "Gracilibacteria"
- "Howlettbacteria"
- "Katanobacteria"
- "Kazanbacteria"
- "Microgenomatia"
- "Paceibacteria"
- "Saccharimonadia"
- "Torokbacteria"
- "Wirthbacteria"

Thermotogida

Synergistetes	Atribacterota Atribacteria "Phoenicimicrobiia" Synergistota Synergistia
Thermocalda	Caldisericota Caldisericia Coprothermobacterota Coprothermobacteria Dictyoglomerota Dictyoglomeria "Lithacetigenota" "Lithacetigenia" "Thermodesulfobiota" "Thermodesulfobiia" Thermotogota "Thermotogia" "Zhurongbacterota"

Fusobacterida

Fusobacteriota
- Fusobacteriia
"Macinerneyibacteriota"
- "Macinerneyibacteriia"
"Muiribacteriota"
- "Muiribacteriia"
"Rifleibacteriota"
- "Ozemibacteria"
"Walliibacteriota"

Hydrobacteria
BV2, BV4

Clade 1

"Aerophobota"
- "Aerophobia"
"Auribacterota"
- "Ancaeobacteria"
- "Auribacteria"
- "Erginobacteria"
- "Tritonobacteria"
"Desantisiibacteriota"
Elusimicrobiota
- Elusimicrobiia
- Endomicrobiia
"Firestoneibacteriota"
"Goldiibacteriota"
"Omnitrophota"
- "Omnitrophia"
- "Velamenicoccia"
"Ratteibacteriota"

Spirochaeto
bacteriobiontes

"Babelota"
- "Babeliae"
"Lindowiibacteriota"
Spirochaetota
- "Brevinematia"
- "Brachyspirae"
- "Exilispiria"
- "Leptospiria"
- Spirochaetia

PVC group
(Planctobacteria)

"Abyssubacteria"
Chlamydiota
- Chlamydiia
"Coatesiibacteriota"
"Hinthialibacterota"
- "Hinthialibacteria"
"Hydrogenedentota"
- "Hydrogenedentia"
Fidelibacterota
- Fidelibacteria
Planctomycetota
- "Brocadiia"
- "Phycisphaeria"
- Planctomycetia
- "Uabimicrobiia"
"Poribacteriota"
"Saltatorellota"
- "Saltatorellae"
"Sumerlaeota"
- "Sumerlaeia"
Verrucomicrobiota
- Kiritimatiellia
- Lentisphaeria
- Verrucomicrobiia

FCB group
(Sphingobacteria)

Bacteroidota
- Bacteroidia
- Chlorobiia
- "Ignavibacteriia"
- "Kapaibacteria"
- "Kryptoniia"
- Rhodothermia
Calditrichota
- Calditrichia
"Cloacimonadota"
- "Cloacimonadia"
"Cosmopoliota"
- "Cosmopolitia"
"Delongiibacteriota"
"Edwardsiibacteriota"
"Effluvivivacota"
"Eiseniibacteriota"
"Electryoneota"
- "Electryoneia"
- "Tariuqbacteria"
"Fermentibacterota"
- "Fermentibacteria"
Fibrobacterota
- Chitinivibrionia
- Fibrobacteria
- "Raymondbacteriia"
Gemmatimonadota
- Gemmatimonadia
- "Glassbacteria"
"Heilongiota"
- "Heilongiia"
"Hydrothermota"
- "Hydrothermia"
- "Stahlbacteria"
"Krumholzibacteriota"
- "Krumholzibacteriia"
"Latescibacterota"
- "Handelsmanbacteria"
- "Latescibacteria"
"Marinisomatota"
- "Marinisomatia"
"Tianyaibacteriota"
"Zixiibacteriota"

Proteobacteria
BV2

Aquificida	"Acidulidesulfobacteriota" "Acidulodesulfobacteriia" Aquificota Aquificia Desulfurobacteriia Campylobacterota "Campylobacteria" Desulfurellia "Calescibacteriota" "Calescibacteriia" Chrysiogenota Chrysiogenia "Dadaibacteriota" "Dadabacteria" Deferribacterota "Deferribacteria" Desulfobacterota G Syntrophorhabdia Thermosulfidibacterota Thermosulfidibacteria
Deltaproteobacteria	Bdellovibrionota Bacteriovoracia Bdellovibrionia Oligoflexia "Binatota" "Binatia" "Deferrimicrobiota" "Deferrimicrobiia" "Deferrisomatota" Deferrisomatia "Desulfuromonadota" Desulfuromonadia "Lernaellota" "Lernaellia" "Methylomirabilota" "Methylomirabilia" "Moduliflexota" "Moduliflexia" Myxococcota Myxococcia "Bradymonadia" Polyangiia Nitrospinota Nitrospinia Nitrospirota Nitrospiria Thermodesulfovibrionia SAR324 "Lambdaproteobacteria" "Schekmaniibacteriota" "Tectimicrobiota" "Entotheonellia" "Thermodesulfobacteriota"
others	Acidobacteriota "Acidobacteriia" "Aminicenantia" Blastocatellia "Fischerbacteria" "Guanabaribacteriia" "Holophagia" "Polarisedimenticolia" Thermoanaerobaculia Vicinamibacteria "Canglongiota" "Canglongiia" "Leptospirillaeota" "Leptospirillia" Pseudomonadota "Caulobacteria" "Mariprofundia" Magnetococcia "Pseudomonadia"

others

Source:Bergey's Manual (2001–2012)
Alternative views:Wikispecies

Taxon identifiers
Paenibacillaceae	Wikidata:Q149385 Wikispecies:Paenibacillaceae CoL:626J2 EoL:7783 EPPO:1PAENF GBIF:4706 iNaturalist:356689 IRMNG:115055 ITIS:956480 LPSN:paenibacillaceae NCBI:186822 NZOR:804d9ada-ae82-45ab-bdb8-48e48e7e7fed Open Tree of Life:68433 WoRMS:564755

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See also

References