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PRKAG1

From Wikipedia, the free encyclopedia
Protein-coding gene in the species Homo sapiens
PRKAG1
Available structures
PDBOrtholog search:PDBeRCSB
List of PDB id codes

2UV4,2UV5,2UV6,2UV7,4CFE,4CFF,4RER,4REW,5EZV,4ZHX

Identifiers
AliasesPRKAG1, AMPKG, protein kinase AMP-activated non-catalytic subunit gamma 1
External IDsOMIM:602742;MGI:108411;HomoloGene:99712;GeneCards:PRKAG1;OMA:PRKAG1 - orthologs
Gene location (Human)
Chromosome 12 (human)
Chr.Chromosome 12 (human)[1]
Chromosome 12 (human)
Genomic location for PRKAG1
Genomic location for PRKAG1
Band12q13.12Start49,002,274bp[1]
End49,018,807bp[1]
Gene location (Mouse)
Chromosome 15 (mouse)
Chr.Chromosome 15 (mouse)[2]
Chromosome 15 (mouse)
Genomic location for PRKAG1
Genomic location for PRKAG1
Band15 F1|15 54.73 cMStart98,710,678bp[2]
End98,729,402bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • gastrocnemius muscle

  • islet of Langerhans

  • right adrenal cortex

  • left ventricle

  • left adrenal gland

  • triceps brachii muscle

  • left adrenal cortex

  • muscle of thigh

  • right auricle of heart

  • apex of heart
Top expressed in
  • saccule

  • granulocyte

  • otic placode

  • otic vesicle

  • right ventricle

  • fetal liver hematopoietic progenitor cell

  • molar

  • internal carotid artery

  • external carotid artery

  • gastrula
More reference expression data
BioGPS
More reference expression data
Gene ontology
Molecular function
Cellular component
Biological process
Sources:Amigo /QuickGO
Orthologs
SpeciesHumanMouse
Entrez

5571

19082

Ensembl

ENSG00000181929

ENSMUSG00000067713

UniProt

P54619

O54950

RefSeq (mRNA)

NM_001206709
NM_001206710
NM_002733
NM_212461

NM_016781

RefSeq (protein)

NP_001193638
NP_001193639
NP_002724

NP_058061

Location (UCSC)Chr 12: 49 – 49.02 MbChr 15: 98.71 – 98.73 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

5'-AMP-activated protein kinase subunit gamma-1 is anenzyme that in humans is encoded by thePRKAG1gene.[5][6][7]

Function

[edit]

The protein encoded by this gene is a regulatory subunit of theAMP-activated protein kinase (AMPK). AMPK is a heterotrimer consisting of an alpha catalytic subunit, and non-catalytic beta and gamma subunits. AMPK is an important energy-sensing enzyme that monitors cellular energy status. In response to cellular metabolic stresses, AMPK is activated, and thusphosphorylates and inactivatesacetyl-CoA carboxylase (ACC) andbeta-hydroxy beta-methylglutaryl-CoA reductase (HMGCR), key enzymes involved in regulating de novo biosynthesis offatty acid andcholesterol. This subunit is one of the gamma regulatory subunits of AMPK.Alternatively spliced transcript variants encoding distinctisoforms have been observed.[7]

Interactions

[edit]

PRKAG1 has been shown tointeract withPRKAB2[8] andPRKAB1.[8]

References

[edit]
  1. ^abcGRCh38: Ensembl release 89: ENSG00000181929Ensembl, May 2017
  2. ^abcGRCm38: Ensembl release 89: ENSMUSG00000067713Ensembl, May 2017
  3. ^"Human PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^"Mouse PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^Stapleton D, Mitchelhill KI, Gao G, Widmer J, Michell BJ, Teh T, House CM, Fernandez CS, Cox T, Witters LA, Kemp BE (January 1996)."Mammalian AMP-activated protein kinase subfamily".The Journal of Biological Chemistry.271 (2):611–4.doi:10.1074/jbc.271.2.611.PMID 8557660.
  6. ^Gao G, Fernandez CS, Stapleton D, Auster AS, Widmer J, Dyck JR, Kemp BE, Witters LA (April 1996)."Non-catalytic beta- and gamma-subunit isoforms of the 5'-AMP-activated protein kinase".The Journal of Biological Chemistry.271 (15):8675–81.doi:10.1074/jbc.271.15.8675.PMID 8621499.
  7. ^ab"Entrez Gene: PRKAG1 protein kinase, AMP-activated, gamma 1 non-catalytic subunit".
  8. ^abCheung PC, Salt IP, Davies SP, Hardie DG, Carling D (March 2000)."Characterization of AMP-activated protein kinase gamma-subunit isoforms and their role in AMP binding".The Biochemical Journal. 346 Pt 3 (3):659–69.doi:10.1042/0264-6021:3460659.PMC 1220898.PMID 10698692.

Further reading

[edit]

External links

[edit]
  • PDBe-KB provides an overview of all the structure information available in the PDB for Human 5'-AMP-activated protein kinase subunit gamma-1 (PRKAG1)
PDB gallery
  • 2uv4: CRYSTAL STRUCTURE OF A CBS DOMAIN PAIR FROM THE REGULATORY GAMMA1 SUBUNIT OF HUMAN AMPK IN COMPLEX WITH AMP
    2uv4: CRYSTAL STRUCTURE OF A CBS DOMAIN PAIR FROM THE REGULATORY GAMMA1 SUBUNIT OF HUMAN AMPK IN COMPLEX WITH AMP
  • 2uv5: CRYSTAL STRUCTURE OF A CBS DOMAIN PAIR FROM THE REGULATORY GAMMA1 SUBUNIT OF HUMAN AMPK IN COMPLEX WITH AMP
    2uv5: CRYSTAL STRUCTURE OF A CBS DOMAIN PAIR FROM THE REGULATORY GAMMA1 SUBUNIT OF HUMAN AMPK IN COMPLEX WITH AMP
  • 2uv6: CRYSTAL STRUCTURE OF A CBS DOMAIN PAIR FROM THE REGULATORY GAMMA1 SUBUNIT OF HUMAN AMPK IN COMPLEX WITH AMP
    2uv6: CRYSTAL STRUCTURE OF A CBS DOMAIN PAIR FROM THE REGULATORY GAMMA1 SUBUNIT OF HUMAN AMPK IN COMPLEX WITH AMP
  • 2uv7: CRYSTAL STRUCTURE OF A CBS DOMAIN PAIR FROM THE REGULATORY GAMMA1 SUBUNIT OF HUMAN AMPK IN COMPLEX WITH AMP
    2uv7: CRYSTAL STRUCTURE OF A CBS DOMAIN PAIR FROM THE REGULATORY GAMMA1 SUBUNIT OF HUMAN AMPK IN COMPLEX WITH AMP
Non-specific serine/threonine protein kinases (EC 2.7.11.1)
Pyruvate dehydrogenase kinase (EC 2.7.11.2)
Dephospho-(reductase kinase) kinase (EC 2.7.11.3)
3-methyl-2-oxobutanoate dehydrogenase (acetyl-transferring) kinase (EC 2.7.11.4)
(isocitrate dehydrogenase (NADP+)) kinase (EC 2.7.11.5)
(tyrosine 3-monooxygenase) kinase (EC 2.7.11.6)
Myosin-heavy-chain kinase (EC 2.7.11.7)
Fas-activated serine/threonine kinase (EC 2.7.11.8)
Goodpasture-antigen-binding protein kinase (EC 2.7.11.9)
  • -
IκB kinase (EC 2.7.11.10)
cAMP-dependent protein kinase (EC 2.7.11.11)
cGMP-dependent protein kinase (EC 2.7.11.12)
Protein kinase C (EC 2.7.11.13)
Rhodopsin kinase (EC 2.7.11.14)
Beta adrenergic receptor kinase (EC 2.7.11.15)
G-protein coupled receptor kinases (EC 2.7.11.16)
Ca2+/calmodulin-dependent (EC 2.7.11.17)
Myosin light-chain kinase (EC 2.7.11.18)
Phosphorylase kinase (EC 2.7.11.19)
Elongation factor 2 kinase (EC 2.7.11.20)
Polo kinase (EC 2.7.11.21)
Serine/threonine-specific protein kinases (EC 2.7.11.21-EC 2.7.11.30)
Polo kinase (EC 2.7.11.21)
Cyclin-dependent kinase (EC 2.7.11.22)
(RNA-polymerase)-subunit kinase (EC 2.7.11.23)
Mitogen-activated protein kinase (EC 2.7.11.24)
MAP3K (EC 2.7.11.25)
Tau-protein kinase (EC 2.7.11.26)
(acetyl-CoA carboxylase) kinase (EC 2.7.11.27)
  • -
Tropomyosin kinase (EC 2.7.11.28)
  • -
Low-density-lipoprotein receptor kinase (EC 2.7.11.29)
  • -
Receptor protein serine/threonine kinase (EC 2.7.11.30)
MAP2K
Activity
Regulation
Classification
Kinetics
Types
Portal:


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