Movatterモバイル変換


[0]ホーム

URL:


Jump to content
WikipediaThe Free Encyclopedia
Search

POLG

From Wikipedia, the free encyclopedia
Protein-coding gene in the species Homo sapiens
POLG
Available structures
PDBOrtholog search:PDBeRCSB
List of PDB id codes

3IKM,4ZTU,4ZTZ,5C53,5C52,5C51

Identifiers
AliasesPOLG, MDP1, MIRAS, MTDPS4A, MTDPS4B, PEO, POLG1, POLGA, SANDO, SCAE, polymerase (DNA) gamma, catalytic subunit, DNA polymerase gamma, catalytic subunit, ORF-Y, POLGARF
External IDsOMIM:174763;MGI:1196389;HomoloGene:2016;GeneCards:POLG;OMA:POLG - orthologs
Gene location (Human)
Chromosome 15 (human)
Chr.Chromosome 15 (human)[1]
Chromosome 15 (human)
Genomic location for POLG
Genomic location for POLG
Band15q26.1Start89,305,198bp[1]
End89,334,861bp[1]
Gene location (Mouse)
Chromosome 7 (mouse)
Chr.Chromosome 7 (mouse)[2]
Chromosome 7 (mouse)
Genomic location for POLG
Genomic location for POLG
Band7|7 D2Start79,095,979bp[2]
End79,116,110bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • granulocyte

  • tibial nerve

  • transverse colon

  • body of stomach

  • right lobe of thyroid gland

  • body of pancreas

  • spleen

  • apex of heart

  • body of uterus

  • minor salivary glands
Top expressed in
  • spermatocyte

  • spermatid

  • yolk sac

  • ventricular zone

  • granulocyte

  • dentate gyrus of hippocampal formation granule cell

  • superior frontal gyrus

  • epiblast

  • thymus

  • muscle of thigh
More reference expression data
BioGPS


More reference expression data
Gene ontology
Molecular function
Cellular component
Biological process
Sources:Amigo /QuickGO
Orthologs
SpeciesHumanMouse
Entrez

5428

18975

Ensembl

ENSG00000140521

ENSMUSG00000039176

UniProt

P54098

P54099

RefSeq (mRNA)

NM_002693
NM_001126131

NM_017462
NM_001360095
NM_001360096

RefSeq (protein)

NP_001119603
NP_002684

n/a

Location (UCSC)Chr 15: 89.31 – 89.33 MbChr 7: 79.1 – 79.12 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

DNA polymerase subunit gamma (POLG or POLG1) is anenzyme that in humans is encoded by thePOLGgene.[5] MitochondrialDNA polymerase isheterotrimeric, consisting of ahomodimer of accessory subunits plus a catalytic subunit. The protein encoded by this gene is the catalytic subunit of mitochondrial DNA polymerase. Defects in this gene are a cause ofprogressive external ophthalmoplegia with mitochondrial DNA deletions 1 (PEOA1), sensory ataxic neuropathydysarthria andophthalmoparesis (SANDO),Alpers-Huttenlocher syndrome (AHS), andmitochondrial neurogastrointestinal encephalopathy syndrome (MNGIE).[6]

Structure

[edit]

POLG is located on theq arm of chromosome 15 in position 26.1 and has 23exons. ThePOLG gene produces a 140 kDa protein composed of 1239amino acids.[7][8] POLG, theprotein encoded by this gene, is a member of the DNA polymerase type-A family. It is a mitochondrion nucleoid with anMg2+ cofactor and 15 turns, 52beta strands, and 39alpha helixes.[9][10] POLG contains apolyglutamine tract near itsN-terminus that may be polymorphic. Two transcript variants encoding the same protein have been found for this gene.[6]

Function

[edit]

POLG is a gene that codes for the catalytic subunit of the mitochondrialDNA polymerase, called DNA polymerase gamma.[6] The humanPOLG cDNA and gene were cloned and mapped to chromosome band 15q25.[11] Ineukaryotic cells, themitochondrial DNA is replicated by DNA polymerase gamma, a trimeric protein complex composed of a catalytic subunit, POLG, and a dimeric accessory subunit of 55 kDa encoded by thePOLG2 gene.[12] The catalytic subunit contains three enzymatic activities, a DNA polymerase activity, a 3’-5’ exonuclease activity that proofreads misincorporatednucleotides, and a 5’-dRPlyase activity required forbase excision repair.

Catalytic activity

[edit]

Deoxynucleoside triphosphate + DNA(n) =diphosphate + DNA(n+1).[9][10]

Clinical significance

[edit]

Mutations in thePOLG gene are associated with severalmitochondrial diseases,progressive external ophthalmoplegia with mitochondrial DNA deletions 1 (PEOA1), sensory ataxic neuropathydysarthria andophthalmoparesis (SANDO),Alpers-Huttenlocher syndrome (AHS), andmitochondrial neurogastrointestinal encephalopathy syndrome (MNGIE).[6] Pathogenic variants have also been linked with fatal congenitalmyopathy and gastrointestinal pseudo-obstruction and fatal infantilehepatic failure.[13][14] A list of all published mutations in thePOLG coding region and their associated disease can be found at the Human DNA Polymerase Gamma Mutation Database.

Mice heterozygous for aPolgmutation are only able to replicate theirmitochondrial DNA inaccurately, so that they sustain a 500-fold higher mutation burden than normal mice. These mice show no clear features of rapidly accelerated aging, indicating that mitochondrial mutations do not have a causal role in naturalaging.[15]

Interactions

[edit]

POLG has been shown to have 50 binaryprotein-protein interactions including 32 co-complex interactions. POLG appears to interact withPOLG2,Dlg4,Tp53, andSod2.[16]

References

[edit]
  1. ^abcGRCh38: Ensembl release 89: ENSG00000140521Ensembl, May 2017
  2. ^abcGRCm38: Ensembl release 89: ENSMUSG00000039176Ensembl, May 2017
  3. ^"Human PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^"Mouse PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^Zullo SJ, Butler L, Zahorchak RJ, Macville M, Wilkes C, Merril CR (Mar 1998)."Localization by fluorescence in situ hybridization (FISH) of human mitochondrial polymerase gamma (POLG) to human chromosome band 15q24→q26, and of mouse mitochondrial polymerase gamma (Polg) to mouse chromosome band 7E, with confirmation by direct sequence analysis of bacterial artificial chromosomes (BACs)".Cytogenetics and Cell Genetics.78 (3–4):281–4.doi:10.1159/000134672.PMID 9465903.
  6. ^abcdEntrez Gene: POLG polymerase (DNA directed), gamma, catalytic subunitPublic Domain This article incorporates text from this source, which is in thepublic domain.
  7. ^Yao, Daniel."Cardiac Organellar Protein Atlas Knowledgebase (COPaKB) —— Protein Information".amino.heartproteome.org. Archived fromthe original on 2018-08-29. Retrieved2018-08-28.
  8. ^Zong NC, Li H, Li H, Lam MP, Jimenez RC, Kim CS, Deng N, Kim AK, Choi JH, Zelaya I, Liem D, Meyer D, Odeberg J, Fang C, Lu HJ, Xu T, Weiss J, Duan H, Uhlen M, Yates JR, Apweiler R, Ge J, Hermjakob H, Ping P (October 2013)."Integration of cardiac proteome biology and medicine by a specialized knowledgebase".Circulation Research.113 (9):1043–53.doi:10.1161/CIRCRESAHA.113.301151.PMC 4076475.PMID 23965338.
  9. ^ab"POLG - DNA polymerase subunit gamma-1 - Homo sapiens (Human) - POLG gene & protein".www.uniprot.org. Retrieved2018-08-28. This article incorporates text available under theCC BY 4.0 license.
  10. ^ab"UniProt: the universal protein knowledgebase".Nucleic Acids Research.45 (D1):D158 –D169. January 2017.doi:10.1093/nar/gkw1099.PMC 5210571.PMID 27899622.
  11. ^Ropp PA, Copeland WC (September 1996). "Cloning and characterization of the human mitochondrial DNA polymerase, DNA polymerase gamma".Genomics.36 (3):449–58.doi:10.1006/geno.1996.0490.PMID 8884268.
  12. ^Graziewicz MA, Longley MJ, Copeland WC (February 2006). "DNA polymerase gamma in mitochondrial DNA replication and repair".Chemical Reviews.106 (2):383–405.doi:10.1021/cr040463d.PMID 16464011.
  13. ^Giordano C, Powell H, Leopizzi M, De Curtis M, de Curtis M, Travaglini C, Sebastiani M, Gallo P, Taylor RW, d'Amati G (March 2009)."Fatal congenital myopathy and gastrointestinal pseudo-obstruction due to POLG1 mutations".Neurology.72 (12):1103–5.doi:10.1212/01.wnl.0000345002.47396.e1.PMC 2821839.PMID 19307547.
  14. ^Müller-Höcker J, Horvath R, Schäfer S, Hessel H, Müller-Felber W, Kühr J, Copeland WC, Seibel P (February 2011)."Mitochondrial DNA depletion and fatal infantile hepatic failure due to mutations in the mitochondrial polymerase γ (POLG) gene: a combined morphological/enzyme histochemical and immunocytochemical/biochemical and molecular genetic study".Journal of Cellular and Molecular Medicine.15 (2):445–56.doi:10.1111/j.1582-4934.2009.00819.x.PMC 3822808.PMID 19538466.
  15. ^Vermulst M, Bielas JH, Kujoth GC, Ladiges WC, Rabinovitch PS, Prolla TA, Loeb LA (April 2007). "Mitochondrial point mutations do not limit the natural lifespan of mice".Nature Genetics.39 (4):540–3.doi:10.1038/ng1988.PMID 17334366.S2CID 291780.
  16. ^"50 binary interactions found for search term POLG".IntAct Molecular Interaction Database. EMBL-EBI. Retrieved2018-08-29.

Further reading

[edit]

External links

[edit]

This article incorporates text from theUnited States National Library of Medicine, which is in thepublic domain.

Retrieved from "https://en.wikipedia.org/w/index.php?title=POLG&oldid=1281283398"
Categories:
Hidden categories:

[8]ページ先頭

©2009-2025 Movatter.jp