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PDLIM4

From Wikipedia, the free encyclopedia
Protein-coding gene in the species Homo sapiens
PDLIM4
Available structures
PDBOrtholog search:PDBeRCSB
List of PDB id codes

2EEG,2V1W,4Q2O

Identifiers
AliasesPDLIM4, RIL, PDZ and LIM domain 4
External IDsOMIM:603422;MGI:1353470;HomoloGene:2735;GeneCards:PDLIM4;OMA:PDLIM4 - orthologs
Gene location (Human)
Chromosome 5 (human)
Chr.Chromosome 5 (human)[1]
Chromosome 5 (human)
Genomic location for PDLIM4
Genomic location for PDLIM4
Band5q31.1Start132,257,696bp[1]
End132,273,454bp[1]
Gene location (Mouse)
Chromosome 11 (mouse)
Chr.Chromosome 11 (mouse)[2]
Chromosome 11 (mouse)
Genomic location for PDLIM4
Genomic location for PDLIM4
Band11 B1.3|11 32.13 cMStart53,945,754bp[2]
End53,959,840bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • left uterine tube

  • body of uterus

  • tibial nerve

  • muscle layer of sigmoid colon

  • cartilage tissue

  • skin of leg

  • gastric mucosa

  • skin of abdomen

  • ascending aorta

  • Descending thoracic aorta
Top expressed in
  • lip

  • body wall

  • condyle

  • uterus

  • epithelium of stomach

  • stroma of bone marrow

  • calvaria

  • ankle joint

  • molar

  • cervix
More reference expression data
BioGPS




More reference expression data
Gene ontology
Molecular function
Cellular component
Biological process
Sources:Amigo /QuickGO
Orthologs
SpeciesHumanMouse
Entrez

8572

30794

Ensembl

ENSG00000131435

ENSMUSG00000020388

UniProt

P50479

P70271

RefSeq (mRNA)

NM_003687
NM_001131027

NM_019417

RefSeq (protein)

NP_001124499
NP_003678

NP_062290

Location (UCSC)Chr 5: 132.26 – 132.27 MbChr 11: 53.95 – 53.96 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

PDZ and LIM domain protein 4 is aprotein that in humans is encoded by thePDLIM4gene.[5][6]


References

[edit]
  1. ^abcGRCh38: Ensembl release 89: ENSG00000131435Ensembl, May 2017
  2. ^abcGRCm38: Ensembl release 89: ENSMUSG00000020388Ensembl, May 2017
  3. ^"Human PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^"Mouse PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^Bashirova AA, Markelov ML, Shlykova TV, Levshenkova EV, Alibaeva RA, Frolova EI (Jun 1998). "The human RIL gene: mapping to human chromosome 5q31.1, genomic organization and alternative transcripts".Gene.210 (2):239–45.doi:10.1016/S0378-1119(98)00080-8.PMID 9573374.
  6. ^"Entrez Gene: PDLIM4 PDZ and LIM domain 4".

Further reading

[edit]


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