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PCSK6

From Wikipedia, the free encyclopedia
Protein-coding gene in the species Homo sapiens
PCSK6
Identifiers
AliasesPCSK6, PACE4, SPC4, proprotein convertase subtilisin/kexin type 6
External IDsOMIM:167405;MGI:102897;HomoloGene:20569;GeneCards:PCSK6;OMA:PCSK6 - orthologs
Gene location (Human)
Chromosome 15 (human)
Chr.Chromosome 15 (human)[1]
Chromosome 15 (human)
Genomic location for PCSK6
Genomic location for PCSK6
Band15q26.3Start101,289,784bp[1]
End101,525,202bp[1]
Gene location (Mouse)
Chromosome 7 (mouse)
Chr.Chromosome 7 (mouse)[2]
Chromosome 7 (mouse)
Genomic location for PCSK6
Genomic location for PCSK6
Band7 C|7 35.36 cMStart65,511,482bp[2]
End65,700,134bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • C1 segment

  • liver

  • right lobe of liver

  • middle frontal gyrus

  • corpus callosum

  • spleen

  • inferior ganglion of vagus nerve

  • inferior olivary nucleus

  • synovial joint

  • subthalamic nucleus
Top expressed in
  • ankle

  • Dermatocranium

  • calvaria

  • stria vascularis

  • lip

  • esophagus

  • left lobe of liver

  • membranous bone

  • body of femur

  • cerebellar vermis
More reference expression data
BioGPS




More reference expression data
Gene ontology
Molecular function
Cellular component
Biological process
Sources:Amigo /QuickGO
Orthologs
SpeciesHumanMouse
Entrez

5046

18553

Ensembl

ENSG00000140479

ENSMUSG00000030513

UniProt

P29122

n/a

RefSeq (mRNA)
NM_138325
NM_001291309
NM_002570
NM_138319
NM_138320

NM_138321
NM_138322
NM_138323
NM_138324

NM_001291184
NM_011048

RefSeq (protein)
NP_001278238
NP_002561
NP_612192
NP_612195
NP_612196

NP_612197
NP_612198

n/a

Location (UCSC)Chr 15: 101.29 – 101.53 MbChr 7: 65.51 – 65.7 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

Proprotein convertase subtilisin/kexin type 6 is anprotease that in humans is encoded by thePCSK6gene which is located in chromosome 15.[5][6] Pcsk6 is a calcium-dependent serine endoprotease that catalyzes the post-translational modification of precursor proteins from its ‘latent’ form to the cleaved ‘active’ form.[5] Active Pcsk6 has been reported to process substrates such as transforming growth factor β,[7] pro-albumin,[8] von Willebrand factor,[9] and corin.[10] Clinically, Pcsk6 is suggested to play a role in left/right asymmetry,[11] structural asymmetry of the brain,[12] handedness,[13][14][15] tumor progression,[16] hemostasis,[9][8][7] and cardiovascular diseases.[10][17]

Function

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The protein encoded by this gene belongs to thesubtilisin-likeproprotein convertase family. The members of this family are proprotein convertases that process latent precursor proteins into their biologically active products. This encoded protein is acalcium-dependent serineendoprotease that can cleave precursor protein at their paired basic amino acid processing sites. Some of its substrates are -transforming growth factor beta related proteins,[7] pro-albumin,[8]von Willebrand factor,[9] and corin.[10] Alternatively spliced transcript variants encoding different isoforms have been identified.[6]

Clinical significance

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During development: Throughout development, the spatial and temporal expression of pcsk6 regulates embryogenesis by activating TGFβ related differentiation factors, which include BMP and Nodal.[7][18] Elevated levels of Pcsk6 was detected in maternal decidual cells of the implantation site and the extraembryonicectoderm.[19] The regulation of proper gradient of Nodal and BMPs is crucial for gastrulation,[20] proximal-distal axis,[21] and establishment of left-right axis patterning.[22]

Developmental Pcsk6 knockout studies found that mice embryos that lack Pcsk6 develop heterotaxia, left pulmonary isomerism, and/or craniofacial malformations due to disruption in specification of anterior-posterior and left-right axis that resulted from the dysregulation of Nodal and BMP signaling.[11]

In humans, Pcsk6 VNTR polymorphism is associated with the structural asymmetry of the frontal and temporal lobe,[12] and  degree of handedness.[13][14]

Cardiovascular disease: Pcsk6 is increasing interest as indicator and factor of cardiovascular disease. Pcsk6 KO mice was shown to develop salt-sensitive hypertension due to failure of pro-corin activation crucial to atrial natriuretic peptide regulation of blood pressure.[10] A hypertensive patient was found to have a G/A mutation on the PCSK6 gene that resulted in an Asp282Asn (D282N) substitution at the Pcsk6 catalytic domain, which in turn, hinders corin processing.[10] In vascular remodeling, Pcsk6 was found to induce smooth muscle cell migration in response to PDGFB by activating MMP14.[17] When Pcsk6 was knocked out, the intimal hyperplasia response toin vivo carotid ligation was lowered.[17]

Other: This gene is thought to play a role in tumor progression.[6][16]

References

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  1. ^abcGRCh38: Ensembl release 89: ENSG00000140479Ensembl, May 2017
  2. ^abcGRCm38: Ensembl release 89: ENSMUSG00000030513Ensembl, May 2017
  3. ^"Human PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^"Mouse PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^abKIEFER, MICHAEL C.; TUCKER, JEFFREY E.; JOH, RICHARD; LANDSBERG, KATHERINE E.; SALTMAN, DAVID; BARR, PHILIP J. (December 1991). "Identification of a Second Human Subtilisin-Like Protease Gene in the fes/fps Region of Chromosome 15".DNA and Cell Biology.10 (10):757–769.doi:10.1089/dna.1991.10.757.ISSN 1044-5498.PMID 1741956.
  6. ^abc"Entrez Gene: PCSK6 proprotein convertase subtilisin/kexin type 6".
  7. ^abcdConstam, Daniel B. (August 2014)."Regulation of TGFβ and related signals by precursor processing".Seminars in Cell & Developmental Biology.32:85–97.doi:10.1016/j.semcdb.2014.01.008.ISSN 1084-9521.PMID 24508081.
  8. ^abcMori, K.; Imamaki, A.; Nagata, K.; Yonetomi, Y.; Kiyokage-Yoshimoto, R.; Martin, T. J.; Gillespie, M. T.; Nagahama, M.; Tsuji, A.; Matsuda, Y. (1999-03-01). "Subtilisin-Like Proprotein Convertases, PACE4 and PC8, as Well as Furin, are Endogenous Proalbumin Convertases in HepG2 Cells".Journal of Biochemistry.125 (3):627–633.doi:10.1093/oxfordjournals.jbchem.a022329.ISSN 0021-924X.PMID 10050053.
  9. ^abcRehemtulla, Alnawaz; Barr, Philip J.; Rhodes, Christopher J.; Kaufman, Randal J. (1993-01-26). "PACE4 is a member of the mammalian propeptidase family that has overlapping but not identical substrate specificity to PACE".Biochemistry.32 (43):11586–11590.doi:10.1021/bi00094a015.ISSN 0006-2960.PMID 8218226.
  10. ^abcdeChen, Shenghan; Cao, Pengxiu; Dong, Ningzheng; Peng, Jianhao; Zhang, Chunyi; Wang, Hao; Zhou, Tiantian; Yang, Junhua; Zhang, Yue; Martelli, Elizabeth E; Naga Prasad, Sathyamangla V (2015-08-10)."PCSK6-mediated corin activation is essential for normal blood pressure".Nature Medicine.21 (9):1048–1053.doi:10.1038/nm.3920.ISSN 1078-8956.PMC 4710517.PMID 26259032.
  11. ^abConstam, D. B.; Robertson, E. J. (2000-05-01)."SPC4/PACE4 regulates a TGFbeta signaling network during axis formation".Genes & Development.14 (9):1146–1155.doi:10.1101/gad.14.9.1146.ISSN 0890-9369.PMC 316583.PMID 10809672.
  12. ^abBerretz, Gesa; Arning, Larissa; Gerding, Wanda M.; Friedrich, Patrick; Fraenz, Christoph; Schlüter, Caroline; Epplen, Jörg T.; Güntürkün, Onur; Beste, Christian; Genç, Erhan; Ocklenburg, Sebastian (2019-05-21). "Structural Asymmetry in the Frontal and Temporal Lobes Is Associated with PCSK6 VNTR Polymorphism".Molecular Neurobiology.56 (11):7765–7773.doi:10.1007/s12035-019-01646-1.ISSN 0893-7648.PMID 31115778.S2CID 160009569.
  13. ^abRobinson, Kelsey J.; Hurd, Peter L.; Read, Silven; Crespi, Bernard J. (April 2016). "The PCSK6 gene is associated with handedness, the autism spectrum, and magical ideation in a non-clinical population".Neuropsychologia.84:205–212.doi:10.1016/j.neuropsychologia.2016.02.020.ISSN 0028-3932.PMID 26921480.S2CID 6142024.
  14. ^abArning, Larissa; Ocklenburg, Sebastian; Schulz, Stefanie; Ness, Vanessa; Gerding, Wanda M.; Hengstler, Jan G.; Falkenstein, Michael; Epplen, Jörg T.; Güntürkün, Onur; Beste, Christian (2013-06-27)."PCSK6 VNTR Polymorphism Is Associated with Degree of Handedness but Not Direction of Handedness".PLOS ONE.8 (6): e67251.Bibcode:2013PLoSO...867251A.doi:10.1371/journal.pone.0067251.ISSN 1932-6203.PMC 3695088.PMID 23826248.
  15. ^Scerri, Thomas S.; Brandler, William M.; Paracchini, Silvia; Morris, Andrew P.; Ring, Susan M.; Richardson, Alex J.; Talcott, Joel B.; Stein, John; Monaco, Anthony P. (2010-11-04)."PCSK6 is associated with handedness in individuals with dyslexia".Human Molecular Genetics.20 (3):608–614.doi:10.1093/hmg/ddq475.ISSN 1460-2083.PMC 3016905.PMID 21051773.
  16. ^abBassi, Daniel E.; Mahloogi, Haleh; Klein-Szanto, Andrés J. P. (2000). "The Proprotein Convertases Furin and PACE4 Play a Significant Role in Tumor Progression".Molecular Carcinogenesis.28 (2):63–69.doi:10.1002/1098-2744(200006)28:2<63::aid-mc1>3.0.co;2-c.ISSN 0899-1987.PMID 10900462.S2CID 22849623.
  17. ^abcRykaczewska, Urszula; Suur, Bianca E.; Röhl, Samuel; Razuvaev, Anton; Lengquist, Mariette; Sabater-Lleal, Maria; van der Laan, Sander W.; Miller, Clint L.; Wirka, Robert C.; Kronqvist, Malin; Gonzalez Diez, Maria (2020-02-28)."PCSK6 Is a Key Protease in the Control of Smooth Muscle Cell Function in Vascular Remodeling".Circulation Research.126 (5):571–585.doi:10.1161/circresaha.119.316063.hdl:1887/3185300.ISSN 0009-7330.PMID 31893970.S2CID 209539709.
  18. ^Constam, Daniel B.; Robertson, Elizabeth J. (1999-01-11)."Regulation of Bone Morphogenetic Protein Activity by Pro Domains and Proprotein Convertases".Journal of Cell Biology.144 (1):139–149.doi:10.1083/jcb.144.1.139.ISSN 0021-9525.PMC 2148113.PMID 9885250.
  19. ^Constam, D B; Calfon, M; Robertson, E J (1996-07-01)."SPC4, SPC6, and the novel protease SPC7 are coexpressed with bone morphogenetic proteins at distinct sites during embryogenesis".The Journal of Cell Biology.134 (1):181–191.doi:10.1083/jcb.134.1.181.ISSN 0021-9525.PMC 2120924.PMID 8698813.
  20. ^Mesnard, D. (2006-05-25)."Nodal specifies embryonic visceral endoderm and sustains pluripotent cells in the epiblast before overt axial patterning".Development.133 (13):2497–505.doi:10.1242/dev.02413.ISSN 0950-1991.PMID 16728477.
  21. ^Arnold, Sebastian J.; Robertson, Elizabeth J. (2009-01-08). "Making a commitment: cell lineage allocation and axis patterning in the early mouse embryo".Nature Reviews Molecular Cell Biology.10 (2):91–103.doi:10.1038/nrm2618.ISSN 1471-0072.PMID 19129791.S2CID 94174.
  22. ^Brennan, J. (2002-09-15)."Nodal activity in the node governs left-right asymmetry".Genes & Development.16 (18):2339–2344.doi:10.1101/gad.1016202.ISSN 0890-9369.PMC 187443.PMID 12231623.

Further reading

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