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PASK

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From Wikipedia, the free encyclopedia

Protein-coding gene in the species Homo sapiens

For the airport in Alaska with ICAO code PASK, seeSelawik Airport.

PASK

Available structures

PDB

Ortholog search:PDBe RCSB

List of PDB id codes
1LL8,3DLS

Identifiers

Aliases

PASK, PASKIN, STK37, PAS domain containing serine/threonine kinase

External IDs

OMIM:607505;MGI:2155936;HomoloGene:9038;GeneCards:PASK;OMA:PASK - orthologs

Gene location (Human)

Chr.	Chromosome 2 (human)^[1]

Band	2q37.3	Start	241,106,099bp^[1]
Band	2q37.3	End	241,150,264bp^[1]

Gene location (Mouse)

Chr.	Chromosome 1 (mouse)^[2]

Band	1\|1 D	Start	93,236,492bp^[2]
Band	1\|1 D	End	93,271,204bp^[2]

RNA expression pattern

Bgee

Human

Mouse (ortholog)

Top expressed in

right uterine tube

oocyte

right testis

left testis

secondary oocyte

lymph node

appendix

caudate nucleus

putamen

nucleus accumbens

Top expressed in

spermatocyte

spermatid

otic vesicle

otic placode

saccule

seminiferous tubule

epiblast

ventricular zone

tail of embryo

gastrula

More reference expression data

BioGPS


More reference expression data

Gene ontology
Molecular function	kinase activity transferase activity nucleotide binding protein kinase activity protein binding ATP binding phosphatidylinositol binding lipid binding protein serine/threonine kinase activity
Cellular component	nucleus cytosol cytoplasm
Biological process	regulation of respiratory gaseous exchange protein autophosphorylation negative regulation of glycogen biosynthetic process positive regulation of translation regulation of glucagon secretion phosphorylation protein phosphorylation energy homeostasis intracellular signal transduction
Sources:Amigo /QuickGO

Orthologs

Species

Human

Mouse

Entrez


23178


269224

Ensembl


ENSG00000115687


ENSMUSG00000026274

UniProt


Q96RG2


Q8CEE6

RefSeq (mRNA)


NM_001252119 NM_001252120 NM_001252122 NM_001252124 NM_015148


NM_080850

RefSeq (protein)


NP_001239048 NP_001239049 NP_001239051 NP_001239053 NP_055963


NP_543126

Location (UCSC)

Chr 2: 241.11 – 241.15 Mb

Chr 1: 93.24 – 93.27 Mb

PubMed search

^[3]

^[4]

Wikidata

View/Edit Human

View/Edit Mouse

PAS domain-containing serine/threonine-protein kinase is anenzyme that in humans is encoded by thePASKgene.^[5]^[6]^[7]^[8]

PAS domains regulate the function of manyintracellular signaling pathways in response to both extrinsic and intrinsic stimuli. PASK is an evolutionarily conserved protein present inyeast,flies, andmammals.[supplied by OMIM]^[8]

References

[edit]

^^a ^b ^cGRCh38: Ensembl release 89: ENSG00000115687 –Ensembl, May 2017
^^a ^b ^cGRCm38: Ensembl release 89: ENSMUSG00000026274 –Ensembl, May 2017
^"Human PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
^"Mouse PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
^Hofer T, Spielmann P, Stengel P, Stier B, Katschinski DM, Desbaillets I, Gassmann M, Wenger RH (Nov 2001)."Mammalian PASKIN, a PAS-serine/threonine kinase related to bacterial oxygen sensors"(PDF).Biochem Biophys Res Commun.288 (4):757–64.doi:10.1006/bbrc.2001.5840.PMID 11688972. Archived fromthe original(PDF) on 2013-11-02. Retrieved2018-12-22.
^Rutter J, Michnoff CH, Harper SM, Gardner KH, McKnight SL (Aug 2001)."PAS kinase: an evolutionarily conserved PAS domain-regulated serine/threonine kinase".Proc Natl Acad Sci U S A.98 (16):8991–6.Bibcode:2001PNAS...98.8991R.doi:10.1073/pnas.161284798.PMC 55361.PMID 11459942.
^da Silva Xavier G, Rutter J, Rutter GA (Jun 2004)."Involvement of Per-Arnt-Sim (PAS) kinase in the stimulation of preproinsulin and pancreatic duodenum homeobox 1 gene expression by glucose".Proc Natl Acad Sci U S A.101 (22):8319–24.Bibcode:2004PNAS..101.8319D.doi:10.1073/pnas.0307737101.PMC 420392.PMID 15148392.
^^a ^b"Entrez Gene: PASK PAS domain containing serine/threonine kinase".

Nakajima D, Okazaki N, Yamakawa H, et al. (2003)."Construction of expression-ready cDNA clones for KIAA genes: manual curation of 330 KIAA cDNA clones"(PDF).DNA Res.9 (3):99–106.doi:10.1093/dnares/9.3.99.PMID 12168954.
Nagase T, Seki N, Tanaka A, et al. (1996)."Prediction of the coding sequences of unidentified human genes. IV. The coding sequences of 40 new genes (KIAA0121-KIAA0160) deduced by analysis of cDNA clones from human cell line KG-1".DNA Res.2 (4):167–74,199–210.doi:10.1093/dnares/2.4.167.PMID 8590280.
Andersson B, Wentland MA, Ricafrente JY, et al. (1996). "A "double adaptor" method for improved shotgun library construction".Anal. Biochem.236 (1):107–13.doi:10.1006/abio.1996.0138.PMID 8619474.
Yu W, Andersson B, Worley KC, et al. (1997)."Large-scale concatenation cDNA sequencing".Genome Res.7 (4):353–8.doi:10.1101/gr.7.4.353.PMC 139146.PMID 9110174.
Ceulemans H, Van Eynde A, Pérez-Callejón E, et al. (1999)."Structure and splice products of the human gene encoding sds22, a putative mitotic regulator of protein phosphatase-1".Eur. J. Biochem.262 (1):36–42.doi:10.1046/j.1432-1327.1999.00344.x.PMID 10231361.
Amezcua CA, Harper SM, Rutter J, Gardner KH (2003)."Structure and interactions of PAS kinase N-terminal PAS domain: model for intramolecular kinase regulation".Structure.10 (10):1349–61.doi:10.1016/S0969-2126(02)00857-2.PMID 12377121.
Strausberg RL, Feingold EA, Grouse LH, et al. (2003)."Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences".Proc. Natl. Acad. Sci. U.S.A.99 (26):16899–903.Bibcode:2002PNAS...9916899M.doi:10.1073/pnas.242603899.PMC 139241.PMID 12477932.
Ota T, Suzuki Y, Nishikawa T, et al. (2004)."Complete sequencing and characterization of 21,243 full-length human cDNAs".Nat. Genet.36 (1):40–5.doi:10.1038/ng1285.PMID 14702039.
Beausoleil SA, Jedrychowski M, Schwartz D, et al. (2004)."Large-scale characterization of HeLa cell nuclear phosphoproteins".Proc. Natl. Acad. Sci. U.S.A.101 (33):12130–5.Bibcode:2004PNAS..10112130B.doi:10.1073/pnas.0404720101.PMC 514446.PMID 15302935.
Gerhard DS, Wagner L, Feingold EA, et al. (2004)."The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)".Genome Res.14 (10B):2121–7.doi:10.1101/gr.2596504.PMC 528928.PMID 15489334.
Ewing RM, Chu P, Elisma F, et al. (2007)."Large-scale mapping of human protein-protein interactions by mass spectrometry".Mol. Syst. Biol.3 (1): 89.doi:10.1038/msb4100134.PMC 1847948.PMID 17353931.
Eckhardt K, Troger J, Reissmann J, et al. (2007)."Male germ cell expression of the PAS domain kinase PASKIN and its novel target eukaryotic translation elongation factor eEF1A1".Cell. Physiol. Biochem.20 (1–4):227–40.doi:10.1159/000104169.PMID 17595531.
Kikani CK, Antonysamy SA, Bonanno JB, et al. (2010)."Structural bases of PAS domain-regulated kinase (PASK) activation in the absence of activation loop phosphorylation".J. Biol. Chem.285 (52):41034–43.doi:10.1074/jbc.M110.157594.PMC 3003402.PMID 20943661.

v t e PDB gallery
1ll8: Structure and interactions of PAS kinase N-terminal PAS domain: Model for intramolecular kinase regulation

Kinases:Serine/threonine-specific protein kinases (EC 2.7.11-12)

Serine/threonine-specific protein kinases (EC 2.7.11.1-EC 2.7.11.20)

Non-specific serine/threonine protein kinases (EC 2.7.11.1)	LATS1 LATS2 MAST1 MAST2 STK38 STK38L CIT ROCK1 SGK SGK2 SGK3 Protein kinase B AKT1 AKT2 AKT3 Ataxia telangiectasia mutated mTOR EIF-2 kinases PKR HRI EIF2AK3 EIF2AK4 Wee1 WEE1
Pyruvate dehydrogenase kinase (EC 2.7.11.2)	PDK1 PDK2 PDK3 PDK4
Dephospho-(reductase kinase) kinase (EC 2.7.11.3)	AMP-activated protein kinase α PRKAA1 PRKAA2 β PRKAB1 PRKAB2 γ PRKAG1 PRKAG2 PRKAG3
3-methyl-2-oxobutanoate dehydrogenase (acetyl-transferring) kinase (EC 2.7.11.4)	BCKDK BCKDHA BCKDHB
(isocitrate dehydrogenase (NADP+)) kinase (EC 2.7.11.5)	IDH2 IDH3A IDH3B IDH3G
(tyrosine 3-monooxygenase) kinase (EC 2.7.11.6)	STK4
Myosin-heavy-chain kinase (EC 2.7.11.7)	Aurora kinase Aurora A kinase Aurora B kinase Aurora C kinase
Fas-activated serine/threonine kinase (EC 2.7.11.8)	FASTK STK10
Goodpasture-antigen-binding protein kinase (EC 2.7.11.9)	-
IκB kinase (EC 2.7.11.10)	CHUK IKK2 TBK1 IKBKE IKBKG IKBKAP
cAMP-dependent protein kinase (EC 2.7.11.11)	Protein kinase A PRKACG PRKACB PRKACA PRKY
cGMP-dependent protein kinase (EC 2.7.11.12)	Protein kinase G PRKG1
Protein kinase C (EC 2.7.11.13)	Protein kinase C Protein kinase Cζ PKC alpha PRKCB1 PRKCD PRKCE PRKCH PRKCG PRKCI PRKCQ Protein kinase N1 PKN2 PKN3
Rhodopsin kinase (EC 2.7.11.14)	Rhodopsin kinase
Beta adrenergic receptor kinase (EC 2.7.11.15)	Beta adrenergic receptor kinase Beta adrenergic receptor kinase-2
G-protein coupled receptor kinases (EC 2.7.11.16)	GRK4 GRK5 GRK6
Ca2+/calmodulin-dependent (EC 2.7.11.17)	BRSK2 CAMK1 CAMK1A CAMK1B CAMK1D CAMK1G CAMK2 CAMK2A CAMK2B CAMK2D CAMK2G CAMK4 MLCK CASK CHEK1 CHEK2 DAPK1 DAPK2 DAPK3 STK11 MAPKAPK2 MAPKAPK3 MAPKAPK5 MARK1 MARK2 MARK3 MARK4 MELK MKNK1 MKNK2 NUAK1 NUAK2 OBSCN PASK PHKG1 PHKG2 PIM1 PIM2 PKD1 PRKD2 PRKD3 PSKH1 SNF1LK2 KIAA0999 STK40 SNF1LK SNRK SPEG TSSK2 Kalirin TRIB1 TRIB2 TRIB3 TRIO Titin DCLK1
Myosin light-chain kinase (EC 2.7.11.18)	MYLK MYLK2 MYLK3 MYLK4
Phosphorylase kinase (EC 2.7.11.19)	PHKA1 PHKA2 PHKB PHKG1 PHKG2
Elongation factor 2 kinase (EC 2.7.11.20)	EEF2K STK19
Polo kinase (EC 2.7.11.21)	PLK1 PLK2 PLK3 PLK4

Serine/threonine-specific protein kinases (EC 2.7.11.21-EC 2.7.11.30)

Polo kinase (EC 2.7.11.21)	PLK1 PLK2 PLK3 PLK4
Cyclin-dependent kinase (EC 2.7.11.22)	CDK1 CDK2 CDKL2 CDK3 CDK4 CDK5 CDKL5 CDK6 CDK7 CDK8 CDK9 CDK10 CDK12 CDC2L5 PCTK1 PCTK2 PCTK3 PFTK1 CDC2L1
(RNA-polymerase)-subunit kinase (EC 2.7.11.23)	RPS6KA5 RPS6KA4 P70S6 kinase P70-S6 Kinase 1 RPS6KB2 RPS6KA2 RPS6KA3 RPS6KA1 RPS6KC1
Mitogen-activated protein kinase (EC 2.7.11.24)	Extracellular signal-regulated MAPK1 MAPK3 MAPK4 MAPK6 MAPK7 MAPK12 MAPK15 C-Jun N-terminal MAPK8 MAPK9 MAPK10 P38 mitogen-activated protein MAPK11 MAPK13 MAPK14
MAP3K (EC 2.7.11.25)	MAP kinase kinase kinases MAP3K1 MAP3K2 MAP3K3 MAP3K4 MAP3K5 MAP3K6 MAP3K7 MAP3K8 RAFs ARAF BRAF KSR1 KSR2 MLKs MAP3K12 MAP3K13 MAP3K9 MAP3K10 MAP3K11 MAP3K7 ZAK CDC7 MAP3K14
Tau-protein kinase (EC 2.7.11.26)	TPK1 TTK GSK-3
(acetyl-CoA carboxylase) kinase (EC 2.7.11.27)	-
Tropomyosin kinase (EC 2.7.11.28)	-
Low-density-lipoprotein receptor kinase (EC 2.7.11.29)	-
Receptor protein serine/threonine kinase (EC 2.7.11.30)	Bone morphogenetic protein receptors BMPR1 BMPR1A BMPR1B BMPR2 ACVR1 ACVR1B ACVR1C ACVR2A ACVR2B ACVRL1 Anti-Müllerian hormone receptor

Dual-specificity kinases (EC 2.7.12)

MAP2K	MAP2K1 MAP2K2 MAP2K3 MAP2K4 MAP2K5 MAP2K6 MAP2K7

v t e Enzymes
Activity	Active site Binding site Catalytic triad Oxyanion hole Enzyme promiscuity Diffusion-limited enzyme Cofactor Enzyme catalysis
Regulation	Allosteric regulation Cooperativity Enzyme inhibitor Enzyme activator
Classification	EC number Enzyme superfamily Enzyme family List of enzymes
Kinetics	Enzyme kinetics Eadie–Hofstee diagram Hanes–Woolf plot Lineweaver–Burk plot Michaelis–Menten kinetics
Types	EC1Oxidoreductases (list) EC2Transferases (list) EC3Hydrolases (list) EC4Lyases (list) EC5Isomerases (list) EC6Ligases (list) EC7Translocases (list)

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