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Neomycin

From Wikipedia, the free encyclopedia
Type of antibiotic
Pharmaceutical compound
Neomycin
Clinical data
Trade namesNeo-rx
AHFS/Drugs.comMonograph
MedlinePlusa682274
Routes of
administration
Topical,oral
ATC code
Legal status
Legal status
Pharmacokinetic data
BioavailabilityNone
Protein bindingN/A
MetabolismN/A
Eliminationhalf-life2 to 3 hours
Identifiers
  • (2RS,3S,4S,5R)-5-Amino-2-(aminomethyl)-6-((2R,3S,4R,5S)-5-((1R,2R,5R,6R)-3,5-diamino-2-((2R,3S,4R,5S)-3-amino-6-(aminomethyl)-4,5-dihydroxytetrahydro-2H-pyran-2-yloxy)-6-hydroxycyclohexyloxy)-4-hydroxy-2-(hydroxymethyl)tetrahydrofuran-3-yloxy)tetrahydro-2H-pyran-3,4-diol
CAS Number
PubChemCID
IUPHAR/BPS
DrugBank
ChemSpider
UNII
KEGG
ChEBI
ChEMBL
ECHA InfoCard100.014.333Edit this at Wikidata
Chemical and physical data
FormulaC23H46N6O13
Molar mass614.650 g·mol−1
3D model (JSmol)
  • O([C@H]3[C@H](O[C@@H]2O[C@H](CO)[C@@H](O[C@H]1O[C@@H](CN)[C@@H](O)[C@H](O)[C@H]1N)[C@H]2O)[C@@H](O)[C@H](N)C[C@@H]3N)[C@H]4O[C@@H]([C@@H](O)[C@H](O)[C@H]4N)CN
  • InChI=1S/C23H46N6O13/c24-2-7-13(32)15(34)10(28)21(37-7)40-18-6(27)1-5(26)12(31)20(18)42-23-17(36)19(9(4-30)39-23)41-22-11(29)16(35)14(33)8(3-25)38-22/h5-23,30-36H,1-4,24-29H2/t5-,6+,7+,8?,9+,10+,11-,12+,13+,14-,15+,16-,17+,18-,19+,20-,21+,22-,23-/m0/s1 ☒N
  • Key:PGBHMTALBVVCIT-DPNHOFNISA-N ☒N
 ☒NcheckY (what is this?)  (verify)

Neomycin is anaminoglycosideantibiotic that displays bactericidal activity againstGram-negative aerobicbacilli and some anaerobic bacilli where resistance has not yet arisen. It is generally not effective againstGram-positive bacilli and anaerobic Gram-negative bacilli. Neomycin comes in oral and topical formulations, including creams, ointments, and eyedrops. Neomycin belongs to theaminoglycoside class of antibiotics that contain two or moreamino sugars connected byglycosidic bonds.

Neomycin was discovered in 1949 by microbiologistSelman Waksman and his student Hubert Lechevalier atRutgers University. Neomycin received approval for medical use in 1952.[1] Rutgers University was granted the patent for neomycin in 1957.[2]

Discovery

[edit]

Neomycin was discovered in 1949 by the microbiologistSelman Waksman and his student Hubert Lechevalier atRutgers University. It is produced naturally by the bacteriumStreptomyces fradiae.[3] Synthesis requires specific nutrient conditions in either stationary or submerged aerobic conditions. The compound is then isolated and purified from the bacterium.[4]

Medical uses

[edit]

Neomycin is typically applied as atopical preparation, such as Neosporin (neomycin/polymyxin B/bacitracin). The antibiotic can also be administered orally, in which case it is usually combined with other antibiotics. Neomycin is not absorbed from the gastrointestinal tract and has been used as a preventive measure forhepatic encephalopathy andhypercholesterolemia. By killing bacteria in the intestinal tract, Neomycin keeps ammonia levels low and prevents hepatic encephalopathy. Due to its poor GI tract absorption, orally administered neomycin has also been used to reduce the risk of post operative infection followinggastrointestinalsurgery.[5]

Waksman and Lechevalier originally noted that neomycin was active against streptomycin-resistant bacteria as well asMycobacterium tuberculosis, the causative agent fortuberculosis.[6] Neomycin has also been used to treatsmall intestinal bacterial overgrowth. Neomycin is not administered via injection, as it is extremelynephrotoxic (damaging to kidney function) even when compared to otheraminoglycosides. The exception is when neomycin is included, in small quantities, as a preservative in some vaccines – typically 25 μg per dose.[7]

In 2022, the combination of neomycin withdexamethasone andpolymyxin B was the 274th most commonly prescribed medication in the United States, with more than 800,000 prescriptions.[8][9]

Spectrum

[edit]

Similar to other aminoglycosides, neomycin has excellent activity againstGram-negative bacteria and is partially effective againstGram-positive bacteria. It is relatively toxic to humans, with allergic reactions noted as a common adverse reaction (see:hypersensitivity).[10] Physicians sometimes recommend using antibiotic ointments without neomycin, such asPolysporin.[11] The following representsminimum inhibitory concentration (MIC) susceptibility data for a few medically significant Gram-negative bacteria.[12]

  • Enterobacter cloacae: >16 μg/ml
  • Escherichia coli: 1 μg/ml
  • Proteus vulgaris: 0.25 μg/ml

Side effects

[edit]

In 2005–06, Neomycin was the fifth-most-prevalent allergen inpatch test results (10.0%).[13] It was namedAllergen of the Year in 2010.[14] Neomycin is also a known GABAgamma-Aminobutyric acid antagonist and can be responsible for seizures and psychosis.[15] Like other aminoglycosides, neomycin has been shown to beototoxic, causingtinnitus, hearing loss, andvestibular problems in a small number of patients. Neomycin affects the cochlea, which is found in the inner ear.[16] Hearing loss is caused by ear hair cell death, which occurs in response to treatment with neomycin.[16] Patients with existing tinnitus or sensorineural hearing loss are advised to speak with a healthcare practitioner about the risks and side effects prior to taking this medication.[citation needed]

Molecular biology

[edit]

Activity

[edit]

Neomycin's antibacterial activity stems from its binding to the 30S subunit of the prokaryoticribosome, where it inhibits prokaryotic translation of mRNA.[17]

Neomycin also exhibits a high binding affinity for phosphatidylinositol 4,5-bisphosphate (PIP2), a phospholipid component of cell membranes.[18]

Resistance

[edit]

Neomycin resistance is conferred by either one of twokanamycin kinase genes.[19] Genes conferring neomycin-resistance are commonly included in DNAplasmids used to establish stable mammaliancell lines expressing cloned proteins in culture. Many commercially available protein expression plasmids contain aneo-resistance gene as aselectable marker.Currently, research is being performed to understand if derivatives of neomycin have the same antibiotic effects while still being effective against neomycin-resistant bacteria.[20]

Biosynthetic pathway

[edit]

Neomycin was first isolated from theStreptomyces fradiae andStreptomyces albogriseus in 1949 (NBRC 12773).[21] Neomycin is a mixture of neomycin B (framycetin); and itsepimer neomycin C, the latter component accounting for some 5–15% of the mixture. It is a basic compound that is most active with an alkaline reaction.[6] It is also thermostable and soluble in water (while insoluble in organic solvents).[6] Neomycin has good activity againstGram-positive andGram-negative bacteria, but isototoxic. Its use is thus restricted to the oral treatment of intestinal infections.[22]

Neomycin B is composed of four linked moieties:D-neosamine, 2-deoxystreptamine (2-DOS),D-ribose, andL-neosamine.[citation needed]

Neomycin A, also called neamine, containsD-neosamine and 2-deoxystreptamine. Six genes are responsible for neamine biosynthesis: DOIS gene (btrC, neo7); L-glutamine:DOI aminotransferase gene (btrS, neo6); a putative glycosyltransferase gene (btrM, neo8); a putative aminotransferase (similar to glutamate-1-semialdehyde 2,1-aminomutase) gene (btrB, neo18); a putative alcohol dehydrogenase gene (btrE, neo5); and another putative dehydrogenase (similar to chorine dehydrogenase and related flavoproteins) gene (btrQ, neo11).[23] A deacetylase acting to remove the acetyl group on N-acetylglucosamine moieties ofaminoglycoside intermediates (Neo16) remains to be clarified (sequence similar to BtrD).[24]

Next is the attachment of theD-ribose viaribosylation of neamine, using 5-phosphoribosyl-1-diphosphate (PRPP) as the ribosyl donor (BtrL, BtrP);[25] glycosyltransferase (potential homologues RibF, LivF, Parf) gene (Neo15).[26]

Neosamine B (L-neosamine B) is most likely biosynthesized in the same manner as the neosamine C (D-niosamine) in neamine biosynthesis, but with an additionalepimerization step required to account for the presence of the epimeric neosamine B in neomycin B.[27]

Neomycin B

Neomycin B and C are 23-carbon molecules with a four-ring structure. Three of the rings are six-membered, and one is five-membered.[28]Neomycin B and Neomycin C are stereoisomers of each other and differ by only one stereocenter one giving the R conformation and the other giving the S conformation.[28] Neomycin C can undergo enzymatic synthesis from ribostamycin.[29]

Composition

[edit]

Standard grade neomycin is composed of several related compounds includingneomycin A (neamine), neomycin B (framycetin), neomycin C, and a few minor compounds found in much lower quantities. Neomycin B is the most active component in neomycin followed by neomycin C and neomycin A. Neomycin A is an inactive degradation product of the C and B isomers.[30] The quantities of these components in neomycin vary from lot-to-lot depending on the manufacturer and manufacturing process.[31]

DNA binding

[edit]

Aminoglycosides such as neomycin are known for their ability to bind to duplex RNA with high affinity.[32] The association constant for neomycin with A-site RNA is in the 109 M−1 range.[33] However, more than 50 years after its discovery, its DNA-binding properties were still unknown. Neomycin has been shown to induce thermal stabilization of triplex DNA, while having little or almost no effect on the B-DNA duplex stabilization.[34] Neomycin was also shown to bind to structures that adopt an A-form structure, triplex DNA being one of them. Neomycin also includes DNA:RNA hybrid triplex formation.[35]

References

[edit]
  1. ^Fischer J, Ganellin CR (2006).Analogue-based Drug Discovery. John Wiley & Sons. p. 507.ISBN 9783527607495.Archived from the original on 2020-08-01. Retrieved2020-05-25.
  2. ^US 2799620, Waksman SA, Lechevalier HA, "Neomycin and process of preparation", issued 18 July 1957, assigned to Rutgers Research and Educational Foundation. 
  3. ^"The Nobel Prize in Physiology or Medicine 1952". Nobel Foundation.Archived from the original on 2018-06-19. Retrieved2008-10-29.
  4. ^"Neomycin".Pharmaceutical Manufacturing Encyclopedia. Vol. 3 (3rd ed.). 2007. pp. 2415–2416.
  5. ^Lewis, R. T. (2002)."Oral versus systemic antibiotic prophylaxis in elective colon surgery: A randomized study and meta-analysis send a message from the 1990s".Canadian Journal of Surgery. Journal Canadien de Chirurgie.45 (3):173–180.PMC 3686946.PMID 12067168.
  6. ^abcWaksman SA, Lechevalier HA (March 1949). "Neomycin, a New Antibiotic Active against Streptomycin-Resistant Bacteria, including Tuberculosis Organisms".Science.109 (2830). New York, N.Y.:305–7.Bibcode:1949Sci...109..305W.doi:10.1126/science.109.2830.305.PMID 17782716.
  7. ^Heidary N, Cohen DE (September 2005). "Hypersensitivity reactions to vaccine components".Dermatitis.16 (3):115–20.doi:10.1097/01206501-200509000-00004.PMID 16242081.S2CID 31248441.
  8. ^"The Top 300 of 2022".ClinCalc.Archived from the original on 30 August 2024. Retrieved30 August 2024.
  9. ^"Dexamethasone; Neomycin; Polymyxin B Drug Usage Statistics, United States, 2013 - 2022".ClinCalc. Retrieved30 August 2024.
  10. ^DermNetdermatitis/neomycin-allergy
  11. ^"Your Medicine Cabinet". DERMAdoctor.com, Inc. Archived fromthe original on 2009-07-09. Retrieved2008-10-19.
  12. ^"Neomycin sulfate, EP Susceptibility and Minimum Inhibitory Concentration (MIC) Data"(PDF). TOKU-E.Archived(PDF) from the original on 2015-12-22. Retrieved2014-03-31.
  13. ^Zug KA, Warshaw EM, Fowler JF, Maibach HI, Belsito DL, Pratt MD, et al. (2009). "Patch-test results of the North American Contact Dermatitis Group 2005-2006".Dermatitis.20 (3):149–60.doi:10.2310/6620.2009.08097.PMID 19470301.S2CID 24088485.
  14. ^McNamara, Damian. (2010).Neomycin Is Named Contact Allergen of the YearArchived 2015-04-22 atarchive.today
  15. ^Lee C, de Silva AJ (March 1979). "Interaction of neuromuscular blocking effects of neomycin and polymyxin B".Anesthesiology.50 (3):218–20.doi:10.1097/00000542-197903000-00010.PMID 219730.S2CID 13551808.
  16. ^abLangman, A. Neomycin ototoxicity. Otolaryngology Head and Neck Surgery 1994, 110, 441-444.
  17. ^Mehta R, Champney WS (September 2003). "Neomycin and paromomycin inhibit 30S ribosomal subunit assembly in Staphylococcus aureus".Current Microbiology.47 (3):237–43.doi:10.1007/s00284-002-3945-9.PMID 14570276.S2CID 23170091.
  18. ^Gabev E, Kasianowicz J, Abbott T, McLaughlin S (February 1989). "Binding of neomycin to phosphatidylinositol 4,5-bisphosphate (PIP2)".Biochimica et Biophysica Acta (BBA) - Biomembranes.979 (1):105–12.doi:10.1016/0005-2736(89)90529-4.PMID 2537103.
  19. ^"G418/neomycin-cross resistance?".Archived from the original on 2009-06-25. Retrieved2008-10-19.
  20. ^Bera, S.; Zhanel, G.; Schweizer, F. Design, Synthesis, and Antibacterial Activities of Neomycin−Lipid Conjugates: Polycationic Lipids with Potent Gram-Positive Activity | Journal of Medicinal Chemistry. Journal of Medicinal Chemistry 2003, 51, 6160-6164.
  21. ^Waksman SA, Lechevalier HA, Harris DA (September 1949)."Neomycin—Production and Antibiotic Properties 123".The Journal of Clinical Investigation.28 (5 Pt 1):934–9.doi:10.1172/JCI102182.PMC 438928.PMID 16695766.
  22. ^Dewick M (March 2009).Medicinal natural products: a biosynthetic approach (3rd ed.). The Atrium, Southern Gate, Chichester, West Sussex, United Kingdom: John Wiley and Sons Ltd. pp. 508, 510, 511.ISBN 978-0-470-74168-9.
  23. ^Kudo F, Yamamoto Y, Yokoyama K, Eguchi T, Kakinuma K (December 2005)."Biosynthesis of 2-deoxystreptamine by three crucial enzymes in Streptomyces fradiae NBRC 12773".The Journal of Antibiotics.58 (12):766–74.doi:10.1038/ja.2005.104.PMID 16506694.
  24. ^Park JW, Park SR, Nepal KK, Han AR, Ban YH, Yoo YJ, et al. (October 2011). "Discovery of parallel pathways of kanamycin biosynthesis allows antibiotic manipulation".Nature Chemical Biology.7 (11):843–52.doi:10.1038/nchembio.671.PMID 21983602.
  25. ^Kudo F, Fujii T, Kinoshita S, Eguchi T (July 2007). "Unique O-ribosylation in the biosynthesis of butirosin".Bioorganic & Medicinal Chemistry.15 (13):4360–8.doi:10.1016/j.bmc.2007.04.040.PMID 17482823.
  26. ^Fan Q, Huang F, Leadlay PF, Spencer JB (September 2008). "The neomycin biosynthetic gene cluster of Streptomyces fradiae NCIMB 8233: genetic and biochemical evidence for the roles of two glycosyltransferases and a deacetylase".Organic & Biomolecular Chemistry.6 (18):3306–14.doi:10.1039/B808734B.PMID 18802637.S2CID 29942953.
  27. ^Llewellyn NM, Spencer JB (December 2006). "Biosynthesis of 2-deoxystreptamine-containing aminoglycoside antibiotics".Natural Product Reports.23 (6):864–74.doi:10.1039/B604709M.PMID 17119636.
  28. ^abNational Center for Biotechnology Information Neomycin.https://pubchem.ncbi.nlm.nih.gov/compound/8378 (accessed Nov 5, 2023).
  29. ^Kudo F, Kawashima T, Yokoyama K, Eguchi T (November 2009)."Enzymatic preparation of neomycin C from ribostamycin".The Journal of Antibiotics.62 (11):643–6.doi:10.1038/ja.2009.88.PMID 19713992.
  30. ^Cammack R, Attwood TK, Campbell PN, Parish JH, Smith AD, Stirling JL, Vella F (2006). "neomycin".Oxford Dictionary of Biochemistry and Molecular Biology (2nd ed.). Oxford University Press. p. 453.
  31. ^Tsuji K, Robertson JH, Baas R, McInnis DJ (September 1969)."Comparative study of responses to neomycins B and C by microbiological and gas-liquid chromatographic assay methods".Applied Microbiology.18 (3):396–8.doi:10.1128/AEM.18.3.396-398.1969.PMC 377991.PMID 4907002.
  32. ^Jin Y, Watkins D, Degtyareva NN, Green KD, Spano MN,Garneau-Tsodikova S, Arya DP (January 2016)."Arginine-linked neomycin B dimers: synthesis, rRNA binding, and resistance enzyme activity".MedChemComm.7 (1):164–169.doi:10.1039/C5MD00427F.PMC 4722958.PMID 26811742.
  33. ^Kaul M, Pilch DS (June 2002). "Thermodynamics of aminoglycoside-rRNA recognition: the binding of neomycin-class aminoglycosides to the A site of 16S rRNA".Biochemistry.41 (24):7695–706.doi:10.1021/bi020130f.PMID 12056901.
  34. ^Arya DP, Coffee RL (September 2000). "DNA triple helix stabilization by aminoglycoside antibiotics".Bioorganic & Medicinal Chemistry Letters.10 (17):1897–9.doi:10.1016/S0960-894X(00)00372-3.PMID 10987412.
  35. ^Arya DP, Coffee RL, Charles I (November 2001). "Neomycin-induced hybrid triplex formation".Journal of the American Chemical Society.123 (44):11093–4.Bibcode:2001JAChS.12311093A.doi:10.1021/ja016481j.PMID 11686727.
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