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NFATC2

From Wikipedia, the free encyclopedia
Protein-coding gene in the species Homo sapiens
NFATC2
Available structures
PDBOrtholog search:PDBeRCSB
List of PDB id codes

1A02,1OWR,1P7H,1PZU,2AS5,2O93,3QRF

Identifiers
AliasesNFATC2, NFAT1, NFATP, nuclear factor of activated T-cells 2, nuclear factor of activated T cells 2
External IDsOMIM:600490;MGI:102463;HomoloGene:7861;GeneCards:NFATC2;OMA:NFATC2 - orthologs
Gene location (Human)
Chromosome 20 (human)
Chr.Chromosome 20 (human)[1]
Chromosome 20 (human)
Genomic location for NFATC2
Genomic location for NFATC2
Band20q13.2Start51,386,957bp[1]
End51,562,831bp[1]
Gene location (Mouse)
Chromosome 2 (mouse)
Chr.Chromosome 2 (mouse)[2]
Chromosome 2 (mouse)
Genomic location for NFATC2
Genomic location for NFATC2
Band2 H3|2 88.91 cMStart168,318,330bp[2]
End168,443,577bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • vena cava

  • synovial joint

  • synovial membrane

  • nipple

  • buccal mucosa cell

  • pylorus

  • tendon of biceps brachii

  • cartilage tissue

  • saphenous vein

  • skin of arm
Top expressed in
  • lumbar subsegment of spinal cord

  • motor neuron

  • substantia nigra

  • ankle

  • condyle

  • facial motor nucleus

  • stroma of bone marrow

  • soleus muscle

  • mesenteric lymph nodes

  • Epithelium of choroid plexus
More reference expression data
BioGPS
n/a
Gene ontology
Molecular function
Cellular component
Biological process
Sources:Amigo /QuickGO
Orthologs
SpeciesHumanMouse
Entrez

4773

18019

Ensembl

ENSG00000101096

ENSMUSG00000027544

UniProt

Q13469

Q60591

RefSeq (mRNA)
NM_001136021
NM_001258292
NM_001258294
NM_001258295
NM_001258296

NM_001258297
NM_012340
NM_173091

NM_001037177
NM_001037178
NM_001136073
NM_001291168
NM_001291169

NM_001291170
NM_001291171
NM_001291172
NM_001291173
NM_001291174
NM_001291175
NM_001291176
NM_001291177
NM_001291178
NM_001291179
NM_010899

RefSeq (protein)
NP_001129493
NP_001245221
NP_001245223
NP_001245224
NP_001245225

NP_001245226
NP_036472
NP_775114

NP_001032254
NP_001032255
NP_001129545
NP_001278097
NP_001278098

NP_001278099
NP_001278100
NP_001278101
NP_001278102
NP_001278103
NP_001278104
NP_001278105
NP_001278106
NP_001278107
NP_001278108
NP_035029

Location (UCSC)Chr 20: 51.39 – 51.56 MbChr 2: 168.32 – 168.44 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

Nuclear factor of activated T-cells, cytoplasmic 2 is aprotein that in humans is encoded by theNFATC2gene.[5]

Function

[edit]

This gene is a member of the nuclear factor of activated T cells (NFAT) family. The product of this gene is aDNA-binding protein with aREL-homology region (RHR) and an NFAT-homology region (NHR). This protein is present in thecytosol and onlytranslocates to the nucleus uponT cell receptor (TCR) stimulation, where it becomes a member of the nuclear factors of activated T cells transcription complex. This complex plays a central role in inducing gene transcription during the immune response. Alternate transcriptional splice variants, encoding different isoforms, have been characterized.[6]

Clinical significance

[edit]

Translocation forming an in frame fusions product betweenEWSR1 gene and the NFATc2 gene has been described inbone tumor with aEwing sarcoma-like clinical appearance. The translocation breakpoint led to the loss of the controlling elements of the NFATc2 protein and the fusion of theN terminal region of the EWSR1 gene conferred constant activation of the protein.[7]

Interactions

[edit]

NFATC2 has been shown tointeract withMEF2D,[8]EP300,[9]IRF4[10] andProtein kinase Mζ.[11]Prostaglandin F2alpha stimulates a NFCT2 pathway stimulating growth ofskeletal muscle cells.[12]

References

[edit]
  1. ^abcGRCh38: Ensembl release 89: ENSG00000101096Ensembl, May 2017
  2. ^abcGRCm38: Ensembl release 89: ENSMUSG00000027544Ensembl, May 2017
  3. ^"Human PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^"Mouse PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^Northrop JP, Ho SN, Chen L, Thomas DJ, Timmerman LA, Nolan GP, Admon A, Crabtree GR (Jun 1994). "NF-AT components define a family of transcription factors targeted in T-cell activation".Nature.369 (6480):497–502.Bibcode:1994Natur.369..497N.doi:10.1038/369497a0.PMID 8202141.S2CID 9920546.
  6. ^"Entrez Gene: NFATC2 nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2".
  7. ^Szuhai K, Ijszenga M, de Jong D, Karseladze A, Tanke HJ, Hogendoorn PC (Apr 2009)."The NFATc2 gene is involved in a novel cloned translocation in a Ewing sarcoma variant that couples its function in immunology to oncology".Clinical Cancer Research.15 (7):2259–68.doi:10.1158/1078-0432.CCR-08-2184.PMID 19318479.
  8. ^Youn HD, Chatila TA, Liu JO (Aug 2000)."Integration of calcineurin and MEF2 signals by the coactivator p300 during T-cell apoptosis".The EMBO Journal.19 (16):4323–31.doi:10.1093/emboj/19.16.4323.PMC 302027.PMID 10944115.
  9. ^García-Rodríguez C, Rao A (Jun 1998)."Nuclear factor of activated T cells (NFAT)-dependent transactivation regulated by the coactivators p300/CREB-binding protein (CBP)".The Journal of Experimental Medicine.187 (12):2031–6.doi:10.1084/jem.187.12.2031.PMC 2212364.PMID 9625762.
  10. ^Rengarajan J, Mowen KA, McBride KD, Smith ED, Singh H, Glimcher LH (Apr 2002)."Interferon regulatory factor 4 (IRF4) interacts with NFATc2 to modulate interleukin 4 gene expression".The Journal of Experimental Medicine.195 (8):1003–12.doi:10.1084/jem.20011128.PMC 2193700.PMID 11956291.
  11. ^San-Antonio B, Iñiguez MA, Fresno M (Jul 2002)."Protein kinase Czeta phosphorylates nuclear factor of activated T cells and regulates its transactivating activity".The Journal of Biological Chemistry.277 (30):27073–80.doi:10.1074/jbc.M106983200.PMID 12021260.
  12. ^Horsley V, Pavlath GK (2003)."Prostaglandin F2(alpha) stimulates growth of skeletal muscle cells via an NFATC2-dependent pathway".J Cell Biol.161 (1):111–8.doi:10.1083/jcb.200208085.PMC 2172881.PMID 12695501.

Further reading

[edit]

External links

[edit]
PDB gallery
  • 1a02: STRUCTURE OF THE DNA BINDING DOMAINS OF NFAT, FOS AND JUN BOUND TO DNA
    1a02: STRUCTURE OF THE DNA BINDING DOMAINS OF NFAT, FOS AND JUN BOUND TO DNA
  • 1owr: CRYSTAL STRUCTURE OF HUMAN NFAT1 BOUND MONOMERICALLY TO DNA
    1owr: CRYSTAL STRUCTURE OF HUMAN NFAT1 BOUND MONOMERICALLY TO DNA
  • 1p7h: Structure of NFAT1 bound as a dimer to the HIV-1 LTR kB element
    1p7h: Structure of NFAT1 bound as a dimer to the HIV-1 LTR kB element
  • 1pzu: An asymmetric NFAT1-RHR homodimer on a pseudo-palindromic, Kappa-B site
    1pzu: An asymmetric NFAT1-RHR homodimer on a pseudo-palindromic, Kappa-B site
  • 1s9k: Crystal Structure of Human NFAT1 and Fos-Jun on the IL-2 ARRE1 Site
    1s9k: Crystal Structure of Human NFAT1 and Fos-Jun on the IL-2 ARRE1 Site
  • 2as5: Structure of the DNA binding domains of NFAT and FOXP2 bound specifically to DNA.
    2as5: Structure of the DNA binding domains of NFAT and FOXP2 bound specifically to DNA.
(1) Basic domains
(1.1) Basicleucine zipper (bZIP)
(1.2) Basic helix-loop-helix (bHLH)
Group A
Group B
Group C
bHLH-PAS
Group D
Group E
Group F
bHLH-COE
(1.3)bHLH-ZIP
(1.4) NF-1
(1.5) RF-X
(1.6) Basic helix-span-helix (bHSH)
(2)Zinc finger DNA-binding domains
(2.1)Nuclear receptor(Cys4)
subfamily 1
subfamily 2
subfamily 3
subfamily 4
subfamily 5
subfamily 6
subfamily 0
(2.2) Other Cys4
(2.3) Cys2His2
(2.4) Cys6
(2.5) Alternating composition
(2.6) WRKY
(3.1)Homeodomain
Antennapedia
ANTP class
protoHOX
Hox-like
metaHOX
NK-like
other
(3.2) Paired box
(3.3)Fork head /winged helix
(3.4)Heat shock factors
(3.5) Tryptophan clusters
(3.6) TEA domain
  • transcriptional enhancer factor
(4)β-Scaffold factors with minor groove contacts
(4.1)Rel homology region
(4.2)STAT
(4.3) p53-like
(4.4)MADS box
(4.6)TATA-binding proteins
(4.7)High-mobility group
(4.9) Grainyhead
(4.10) Cold-shock domain
(4.11) Runt
(0) Other transcription factors
(0.2) HMGI(Y)
(0.3)Pocket domain
(0.5)AP-2/EREBP-related factors
(0.6) Miscellaneous

This article incorporates text from theUnited States National Library of Medicine, which is in thepublic domain.

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