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Mothers against decapentaplegic homolog 6

From Wikipedia, the free encyclopedia
Protein-coding gene in the species Homo sapiens
SMAD6
Identifiers
AliasesSMAD6, AOVD2, HsT17432, MADH6, MADH7, SMAD family member 6
External IDsOMIM:602931;MGI:1336883;HomoloGene:4079;GeneCards:SMAD6;OMA:SMAD6 - orthologs
Gene location (Human)
Chromosome 15 (human)
Chr.Chromosome 15 (human)[1]
Chromosome 15 (human)
Genomic location for SMAD6
Genomic location for SMAD6
Band15q22.31Start66,702,236bp[1]
End66,782,849bp[1]
Gene location (Mouse)
Chromosome 9 (mouse)
Chr.Chromosome 9 (mouse)[2]
Chromosome 9 (mouse)
Genomic location for SMAD6
Genomic location for SMAD6
Band9|9 CStart63,860,358bp[2]
End63,929,341bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • right lung

  • glomerulus

  • metanephric glomerulus

  • lower lobe of lung

  • right auricle of heart

  • upper lobe of lung

  • upper lobe of left lung

  • visceral pleura

  • Epithelium of choroid plexus

  • right lobe of thyroid gland
Top expressed in
  • right lung

  • right lung lobe

  • molar

  • atrium

  • mesorchium

  • epithelium of stomach

  • choroid plexus of fourth ventricle

  • external carotid artery

  • left lung

  • gastrula
More reference expression data
BioGPS


More reference expression data
Gene ontology
Molecular function
Cellular component
Biological process
Sources:Amigo /QuickGO
Orthologs
SpeciesHumanMouse
Entrez

4091

17130

Ensembl

ENSG00000137834

ENSMUSG00000036867

UniProt

O43541

O35182

RefSeq (mRNA)

NM_001142861
NM_005585

NM_008542

RefSeq (protein)

NP_005576

NP_032568

Location (UCSC)Chr 15: 66.7 – 66.78 MbChr 9: 63.86 – 63.93 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

SMAD family member 6, also known asSMAD6, is aprotein that in humans is encoded by theSMAD6gene.[5]

SMAD6 is a protein that, as its name describes, is a homolog of theDrosophila gene "mothers against decapentaplegic". It belongs to theSMAD family of proteins, which belong to theTGFβ superfamily of modulators. Like many other TGFβ family members SMAD6 is involved incell signalling. It acts as a regulator of TGFβ family (such asbone morphogenetic proteins) activity by competing withSMAD4 and preventing the transcription ofSMAD4's gene products. There are two known isoforms of this protein.

Nomenclature

[edit]

The SMAD proteins are homologs of both the drosophila protein, mothers against decapentaplegic (MAD) and theC. elegans protein SMA. The name is a combination of the two. DuringDrosophila research, it was found that a mutation in the geneMAD in the mother repressed the genedecapentaplegic in the embryo. The phrase "Mothers against" was added as a humorous take-off on organizations opposing various issues e.g.,Mothers Against Drunk Driving, or MADD; and based on a tradition of such unusual naming within the gene research community.[6]

Disease associations

[edit]

Heterozygous, damaging mutations in SMAD6 are the most frequent genetic cause of non-syndromiccraniosynostosis identified to date.[7]

Interactions

[edit]

Mothers against decapentaplegic homolog 6 has been shown tointeract with:


References

[edit]
  1. ^abcGRCh38: Ensembl release 89: ENSG00000137834Ensembl, May 2017
  2. ^abcGRCm38: Ensembl release 89: ENSMUSG00000036867Ensembl, May 2017
  3. ^"Human PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^"Mouse PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^"Entrez Gene: SMAD6 SMAD family member 6".
  6. ^"Sonic Hedgehog, DICER, and the Problem With Naming Genes", Sep 26, 2014, Michael White. psmag.com
  7. ^Timberlake AT, Choi J, Zaidi S, Lu Q, Nelson-Williams C, Brooks ED, et al. (September 2016)."BMP2 alleles".eLife.5.doi:10.7554/eLife.20125.PMC 5045293.PMID 27606499.
  8. ^Bai S, Shi X, Yang X, Cao X (March 2000)."Smad6 as a transcriptional corepressor".J. Biol. Chem.275 (12):8267–70.doi:10.1074/jbc.275.12.8267.PMID 10722652.
  9. ^Kimura N, Matsuo R, Shibuya H, Nakashima K, Taga T (June 2000)."BMP2-induced apoptosis is mediated by activation of the TAK1-p38 kinase pathway that is negatively regulated by Smad6".J. Biol. Chem.275 (23):17647–52.doi:10.1074/jbc.M908622199.PMID 10748100.
  10. ^Yanagisawa M, Nakashima K, Takeda K, Ochiai W, Takizawa T, Ueno M, Takizawa M, Shibuya H, Taga T (December 2001)."Inhibition of BMP2-induced, TAK1 kinase-mediated neurite outgrowth by Smad6 and Smad7".Genes Cells.6 (12):1091–9.doi:10.1046/j.1365-2443.2001.00483.x.PMID 11737269.S2CID 25476125.
  11. ^Topper JN, Cai J, Qiu Y, Anderson KR, Xu YY, Deeds JD, Feeley R, Gimeno CJ, Woolf EA, Tayber O, Mays GG, Sampson BA, Schoen FJ, Gimbrone MA, Falb D (August 1997)."Vascular MADs: two novel MAD-related genes selectively inducible by flow in human vascular endothelium".Proc. Natl. Acad. Sci. U.S.A.94 (17):9314–9.Bibcode:1997PNAS...94.9314T.doi:10.1073/pnas.94.17.9314.PMC 23174.PMID 9256479.
  12. ^Imoto S, Sugiyama K, Muromoto R, Sato N, Yamamoto T, Matsuda T (September 2003)."Regulation of transforming growth factor-beta signaling by protein inhibitor of activated STAT, PIASy through Smad3".J. Biol. Chem.278 (36):34253–8.doi:10.1074/jbc.M304961200.hdl:2115/28123.PMID 12815042.
  13. ^Datta PK, Moses HL (May 2000)."STRAP and Smad7 synergize in the inhibition of transforming growth factor beta signaling".Mol. Cell. Biol.20 (9):3157–67.doi:10.1128/MCB.20.9.3157-3167.2000.PMC 85610.PMID 10757800.

Further reading

[edit]
TGF beta superfamily of ligands
Ligand ofACVR orTGFBR
Ligand ofBMPR
TGF beta receptors
(Activin,BMP,family)
TGFBR1:
TGFBR2:
TGFBR3:
Transducers/SMAD
Ligand inhibitors
Coreceptors
Other
(1) Basic domains
(1.1) Basicleucine zipper (bZIP)
(1.2) Basic helix-loop-helix (bHLH)
Group A
Group B
Group C
bHLH-PAS
Group D
Group E
Group F
bHLH-COE
(1.3)bHLH-ZIP
(1.4) NF-1
(1.5) RF-X
(1.6) Basic helix-span-helix (bHSH)
(2)Zinc finger DNA-binding domains
(2.1)Nuclear receptor(Cys4)
subfamily 1
subfamily 2
subfamily 3
subfamily 4
subfamily 5
subfamily 6
subfamily 0
(2.2) Other Cys4
(2.3) Cys2His2
(2.4) Cys6
(2.5) Alternating composition
(2.6) WRKY
(3.1)Homeodomain
Antennapedia
ANTP class
protoHOX
Hox-like
metaHOX
NK-like
other
(3.2) Paired box
(3.3)Fork head /winged helix
(3.4)Heat shock factors
(3.5) Tryptophan clusters
(3.6) TEA domain
  • transcriptional enhancer factor
(4)β-Scaffold factors with minor groove contacts
(4.1)Rel homology region
(4.2)STAT
(4.3) p53-like
(4.4)MADS box
(4.6)TATA-binding proteins
(4.7)High-mobility group
(4.9) Grainyhead
(4.10) Cold-shock domain
(4.11) Runt
(0) Other transcription factors
(0.2) HMGI(Y)
(0.3)Pocket domain
(0.5)AP-2/EREBP-related factors
(0.6) Miscellaneous
Type I
ALK1 (ACVRL1)
ALK2 (ACVR1A)
ALK3 (BMPR1A)
ALK4 (ACVR1B)
ALK5 (TGFβR1)
ALK6 (BMPR1B)
ALK7 (ACVR1C)
Type II
TGFβR2
BMPR2
ACVR2A (ACVR2)
ACVR2B
AMHR2 (AMHR)
Type III
TGFβR3 (β-glycan)
Unsorted


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