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MT-CYB

From Wikipedia, the free encyclopedia
A mitochondrial protein-coding gene whose product is involved in the respiratory chain
CYTB
Identifiers
AliasesCYTB, MTCYB, MT-CYB, cytochrome b
External IDsOMIM:516020;MGI:102501;HomoloGene:5013;GeneCards:CYTB;OMA:CYTB - orthologs
Gene location (Human)
Mitochondrial DNA (human)
Chr.Mitochondrial DNA (human)[1]
Bandn/aStart14,747bp[1]
End15,887bp[1]
Gene location (Mouse)
Mitochondrial DNA (mouse)
Chr.Mitochondrial DNA (mouse)[2]
Bandn/aStart14,145bp[2]
End15,288bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • apex of heart

  • gastric mucosa

  • right lobe of thyroid gland

  • left ventricle

  • putamen

  • caudate nucleus

  • left uterine tube

  • nucleus accumbens

  • subcutaneous adipose tissue

  • right adrenal cortex
Top expressed in
  • neural layer of retina

  • Hypothalamus

  • striatum of neuraxis

  • adrenal gland

  • dentate gyrus of hippocampal formation granule cell

  • right kidney

  • primary visual cortex

  • superior frontal gyrus

  • Cerebellum

  • cerebellar cortex
More reference expression data
BioGPS
n/a
Gene ontology
Molecular function
Cellular component
Biological process
Sources:Amigo /QuickGO
Orthologs
SpeciesHumanMouse
Entrez

4519

17711

Ensembl

ENSG00000198727

ENSMUSG00000064370

UniProt

P00156

P00158

RefSeq (mRNA)

n/a

n/a

RefSeq (protein)

n/a

NP_904340

Location (UCSC)Chr M: 0.01 – 0.02 MbChr M: 0.01 – 0.02 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse
Location of theMT-CYB gene in the human mitochondrial genome (coral box).

Cytochrome b is aprotein that in humans is encoded by theMT-CYB gene.[5] Itsgene product is a subunit of the respiratory chain proteinubiquinol–cytochromec reductase (UQCR, complex III or cytochromebc1 complex), which consists of the products of one mitochondrially encoded gene,MT-CYB (mitochondrialcytochrome b), and ten nuclear genes—UQCRC1,UQCRC2,CYC1,UQCRFS1 (Rieske protein),UQCRB, "11kDa protein",UQCRH (cyt c1 Hinge protein), Rieske protein presequence, "cyt c1 associated protein", andRieske-associated protein.

Structure

[edit]

TheMT-CYB gene is located on the p arm ofmitochondrial DNA in position 12 and spans 1,140 base pairs.[5] The gene produces a 42.7 kDa protein namedcytochrome b composed of 380amino acids.[6][7]Cytochrome b is an integral membrane protein with hydrophobic properties. The catalytic core of the enzyme is composed of eight transmembrane helices, theiron-sulfur protein, andcytochrome c1.[8]Cytochrome b is a fundamental component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex) that is part of themitochondrial respiratory chain. The b-c1 complex mediates electron transfer fromubiquinol to cytochrome c.[9] The structure of the complex is a symmetric homodimer. It is composed of eleven structural subunits, including onemitochondrial genome encoded cytochrome b and ten other nucleus encoded subunits. These subunits include three respiratory subunits (MT-CYB,CYC1 andUQCRFS1), two core proteins (UQCRC1 andUQCRC2) and six low-molecular weight proteins (UQCRH/QCR6,UQCRB/QCR7,UQCRQ/QCR8,UQCR10/QCR9,UQCR11/QCR10 and a cleavage product ofUQCRFS1). The totalmolecular mass of the complex is about 450 kDa.[10][9]

Function

[edit]

The mitochondrialcytochrome b is fundamental for the assembly and function of Complex III of themitochondrial respiratory chain.[11] Complex III is responsible for thecatalysis of electron transfer fromcoenzyme Q tocytochrome c in themitochondrial respiratory chain by translocating protons concomitantly across theinner membrane of the mitochondria.[12][9] The transfer of electrons then contributes to the generation of aproton gradient across themitochondrial membrane that is then used for ATP synthesis.[9]

Clinical significance

[edit]

Mutations inMT-CYB can result in mitochondrial deficiencies and associated disorders. It is majorly associated with a complex III deficiency, a deficiency in an enzyme complex which catalyzes electron transfer fromcoenzyme Q tocytochrome c in themitochondrial respiratory chain. A complex III deficiency can result in a highly variable phenotype depending on which tissues are affected.[9] Most frequent clinical manifestations include progressiveexercise intolerance andcardiomyopathy. Occasional multisystem disorders accompanied by exercise intolerance may arise as well, in forms ofdeafness,mental retardation,retinitis pigmentosa,cataract,growth retardation, andepilepsy.[9] Other phenotypes include mitochondrialencephalomyopathy,mitochondrial myopathy,Leber hereditary optic neuropathy,muscle weakness,myoglobinuria,blood acidosis, renaltubulopathy, and more.[9][10] Complex III deficiency is known to be rare amongmitochondrial diseases and may follow amaternal ormendelian mode of inheritance due to its duality of genetic origin.[8]

References

[edit]
  1. ^abcGRCh38: Ensembl release 89: ENSG00000198727Ensembl, May 2017
  2. ^abcGRCm38: Ensembl release 89: ENSMUSG00000064370Ensembl, May 2017
  3. ^"Human PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^"Mouse PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^ab"Entrez Gene: CYTB cytochrome b".
  6. ^Zong NC, Li H, Li H, Lam MP, Jimenez RC, Kim CS, Deng N, Kim AK, Choi JH, Zelaya I, Liem D, Meyer D, Odeberg J, Fang C, Lu HJ, Xu T, Weiss J, Duan H, Uhlen M, Yates JR, Apweiler R, Ge J, Hermjakob H, Ping P (Oct 2013)."Integration of cardiac proteome biology and medicine by a specialized knowledgebase".Circulation Research.113 (9):1043–53.doi:10.1161/CIRCRESAHA.113.301151.PMC 4076475.PMID 23965338.
  7. ^"cytochrome b".Cardiac Organellar Protein Atlas Knowledgebase (COPaKB).
  8. ^abFragaki K, Procaccio V, Bannwarth S, Serre V, O'Hearn S, Potluri P, Augé G, Casagrande F, Caruba C, Lambert JC, Paquis-Flucklinger V (September 2009). "A neonatal polyvisceral failure linked to a de novo homoplasmic mutation in the mitochondrially encoded cytochrome b gene".Mitochondrion.9 (5):346–52.doi:10.1016/j.mito.2009.06.002.PMID 19563916.
  9. ^abcdefg"UniProtKB - P00156 (CYB_HUMAN)". The UniProt Consortium.
  10. ^abGil Borlado MC, Moreno Lastres D, Gonzalez Hoyuela M, Moran M, Blazquez A, Pello R, Marin Buera L, Gabaldon T, Garcia Peñas JJ, Martín MA, Arenas J, Ugalde C (September 2010)."Impact of the mitochondrial genetic background in complex III deficiency".PLOS ONE.5 (9): e12801.Bibcode:2010PLoSO...512801G.CiteSeerX 10.1.1.350.7243.doi:10.1371/journal.pone.0012801.PMC 2941448.PMID 20862300.
  11. ^Massie R, Wong LJ, Milone M (July 2010). "Exercise intolerance due to cytochrome b mutation".Muscle & Nerve.42 (1):136–40.doi:10.1002/mus.21649.PMID 20544923.S2CID 23759055.
  12. ^Baum H, Rieske JS, Silman HI, Lipton SH (March 1967)."On the mechanism of electron transfer in complex iii of the electron transfer chain".Proceedings of the National Academy of Sciences of the United States of America.57 (3):798–805.Bibcode:1967PNAS...57..798B.doi:10.1073/pnas.57.3.798.PMC 335578.PMID 16591533.

Further reading

[edit]
Mitochondrial proteins
Outer membrane
fatty acid degradation
tryptophan metabolism
monoamine neurotransmitter
metabolism
Intermembrane space
Inner membrane
oxidative phosphorylation
pyrimidine metabolism
mitochondrial shuttle
steroidogenesis
other
Matrix
citric acid cycle
anaplerotic reactions
urea cycle
alcohol metabolism
Other/to be sorted
Mitochondrial DNA
Complex I
Complex III
Complex IV
ATP synthase
tRNA
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