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KMT2C

From Wikipedia, the free encyclopedia
(Redirected fromMLL3)
Protein-coding gene in the species Homo sapiens

KMT2C
Available structures
PDBOrtholog search:PDBeRCSB
List of PDB id codes

2YSM,2YUK,3UVL,4ERY,5F59,5F6K

Identifiers
AliasesKMT2C, HALR, MLL3, lysine methyltransferase 2C, KLEFS2
External IDsOMIM:606833;MGI:2444959;HomoloGene:46480;GeneCards:KMT2C;OMA:KMT2C - orthologs
Gene location (Human)
Chromosome 7 (human)
Chr.Chromosome 7 (human)[1]
Chromosome 7 (human)
Genomic location for KMT2C
Genomic location for KMT2C
Band7q36.1Start152,134,922bp[1]
End152,436,644bp[1]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • oocyte

  • caput epididymis

  • skin of arm

  • pancreatic epithelial cell

  • corpus epididymis

  • cardiac muscle tissue of right atrium

  • Achilles tendon

  • sural nerve

  • bone marrow cell

  • seminal vesicula
    n/a
More reference expression data
BioGPS
n/a
Gene ontology
Molecular function
Cellular component
Biological process
Sources:Amigo /QuickGO
Orthologs
SpeciesHumanMouse
Entrez

58508

231051

Ensembl

ENSG00000055609

n/a

UniProt

Q8NEZ4

Q8BRH4

RefSeq (mRNA)

NM_021230
NM_170606

NM_001081383
NM_177283

RefSeq (protein)

NP_733751

n/a

Location (UCSC)Chr 7: 152.13 – 152.44 Mbn/a
PubMed search[2][3]
Wikidata
View/Edit HumanView/Edit Mouse

Lysine N-methyltransferase 2C (KMT2C) also known asmyeloid/lymphoid or mixed-lineage leukemia protein 3 (MLL3) is anenzyme that in humans is encoded by theKMT2Cgene.[4][5]

Function

[edit]

This gene is a member of the myeloid/lymphoid or mixed-lineage leukemia (MLL) family and encodes a nuclear protein with anAT-hook DNA-binding domain, a DHHC-type zinc finger, sixPHD-type zinc fingers, aSET domain, a post-SET domain and aRING-type zinc finger. This protein is a member of the ASC-2/NCOA6 complex (ASCOM), which possesses histone methylation activity and is involved in transcriptional coactivation. Alternate transcriptional splice variants, encoding different isoforms, have been characterized.[5]

Interactions

[edit]

MLL3 has been shown tointeract withNCOA6[6] andRBBP5.[6]

Clinical significance

[edit]

Mutations of the KMT2C gene causeKleefstra syndrome-2, a neurodevelopmental disorder first described in 2012.[7]

References

[edit]
  1. ^abcGRCh38: Ensembl release 89: ENSG00000055609Ensembl, May 2017
  2. ^"Human PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  3. ^"Mouse PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^Nagase T, Kikuno R, Ishikawa K, Hirosawa M, Ohara O (April 2000)."Prediction of the coding sequences of unidentified human genes. XVII. The complete sequences of 100 new cDNA clones from brain which code for large proteins in vitro".DNA Research.7 (2):143–150.doi:10.1093/dnares/7.2.143.PMID 10819331.
  5. ^ab"Entrez Gene: MLL3 myeloid/lymphoid or mixed-lineage leukemia 3".
  6. ^abGoo YH, Sohn YC, Kim DH, Kim SW, Kang MJ, Jung DJ, et al. (January 2003)."Activating signal cointegrator 2 belongs to a novel steady-state complex that contains a subset of trithorax group proteins".Molecular and Cellular Biology.23 (1):140–149.doi:10.1128/MCB.23.1.140-149.2003.PMC 140670.PMID 12482968.
  7. ^Kleefstra T, Kramer JM, Neveling K, Willemsen MH, Koemans TS, Vissers LE, et al. (July 2012)."Disruption of an EHMT1-associated chromatin-modification module causes intellectual disability".American Journal of Human Genetics.91 (1):73–82.doi:10.1016/j.ajhg.2012.05.003.PMC 3397275.PMID 22726846.

Further reading

[edit]

External links

[edit]

This article incorporates text from theUnited States National Library of Medicine, which is in thepublic domain.

(1) Basic domains
(1.1) Basicleucine zipper (bZIP)
(1.2) Basic helix-loop-helix (bHLH)
Group A
Group B
Group C
bHLH-PAS
Group D
Group E
Group F
bHLH-COE
(1.3)bHLH-ZIP
(1.4) NF-1
(1.5) RF-X
(1.6) Basic helix-span-helix (bHSH)
(2)Zinc finger DNA-binding domains
(2.1)Nuclear receptor(Cys4)
subfamily 1
subfamily 2
subfamily 3
subfamily 4
subfamily 5
subfamily 6
subfamily 0
(2.2) Other Cys4
(2.3) Cys2His2
(2.4) Cys6
(2.5) Alternating composition
(2.6) WRKY
(3.1)Homeodomain
Antennapedia
ANTP class
protoHOX
Hox-like
metaHOX
NK-like
other
(3.2) Paired box
(3.3)Fork head /winged helix
(3.4)Heat shock factors
(3.5) Tryptophan clusters
(3.6) TEA domain
  • transcriptional enhancer factor
(4)β-Scaffold factors with minor groove contacts
(4.1)Rel homology region
(4.2)STAT
(4.3) p53-like
(4.4)MADS box
(4.6)TATA-binding proteins
(4.7)High-mobility group
(4.9) Grainyhead
(4.10) Cold-shock domain
(4.11) Runt
(0) Other transcription factors
(0.2) HMGI(Y)
(0.3)Pocket domain
(0.5)AP-2/EREBP-related factors
(0.6) Miscellaneous
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