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LAMP1

From Wikipedia, the free encyclopedia
Protein-coding gene in the species Homo sapiens

LAMP1
Identifiers
AliasesLAMP1, CD107a, LAMPA, LGP120, lysosomal associated membrane protein 1
External IDsOMIM:153330;MGI:96745;HomoloGene:4061;GeneCards:LAMP1;OMA:LAMP1 - orthologs
Gene location (Human)
Chromosome 13 (human)
Chr.Chromosome 13 (human)[1]
Chromosome 13 (human)
Genomic location for LAMP1
Genomic location for LAMP1
Band13q34Start113,297,239bp[1]
End113,323,672bp[1]
Gene location (Mouse)
Chromosome 8 (mouse)
Chr.Chromosome 8 (mouse)[2]
Chromosome 8 (mouse)
Genomic location for LAMP1
Genomic location for LAMP1
Band8 A1.1|8 5.73 cMStart13,209,161bp[2]
End13,225,338bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • endothelial cell

  • visceral pleura

  • parotid gland

  • inferior olivary nucleus

  • dorsal motor nucleus of vagus nerve

  • glomerulus

  • kidney tubule

  • metanephric glomerulus

  • gingival epithelium

  • pancreatic ductal cell
Top expressed in
  • stroma of bone marrow

  • vestibular membrane of cochlear duct

  • calvaria

  • right kidney

  • lactiferous gland

  • spermatocyte

  • sciatic nerve

  • mesenteric lymph nodes

  • molar

  • carotid body
More reference expression data
BioGPS




More reference expression data
Gene ontology
Molecular function
Cellular component
Biological process
Sources:Amigo /QuickGO
Orthologs
SpeciesHumanMouse
Entrez

3916

16783

Ensembl

ENSG00000185896

ENSMUSG00000031447

UniProt

P11279

P11438

RefSeq (mRNA)

NM_005561

NM_010684
NM_001317353

RefSeq (protein)

NP_005552

NP_001304282
NP_034814

Location (UCSC)Chr 13: 113.3 – 113.32 MbChr 8: 13.21 – 13.23 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

Lysosomal-associated membrane protein 1 (LAMP-1) also known aslysosome-associated membrane glycoprotein 1 andCD107a (Cluster ofDifferentiation 107a), is aprotein that in humans is encoded by theLAMP1gene. The humanLAMP1 gene is located on the long arm (q) of chromosome 13 at region 3, band 4 (13q34).

Immunofluorescence staining of HeLa Cells with antibody to reveal lysosomal LAMP1 in red andvimentin containingintermediate filaments in green. Nuclear DNA is seen in blue. Antibodies and image courtesy EnCor Biotechnology Inc.

Lysosomal-associated membrane protein 1 is aglycoprotein from a family ofLysosome-associated membrane glycoproteins.[5] The LAMP-1 glycoprotein is atype I transmembrane protein[6] which is expressed at high or medium levels in at least 76 different normal tissue cell types.[7] It resides primarily acrosslysosomal membranes,[8] and functions to provideselectins withcarbohydrateligands.[5] CD107a has also been shown to be a marker ofdegranulation onlymphocytes such asCD8+ andNK cells,[9] and may also play a role intumorcell differentiation andmetastasis.

Structure

[edit]

Residing primarily across lysosomal membranes, these glycoproteins consist of a large, highlyglycosylated end with N-linked carbon chains on the luminal side of the membrane, and a short C-terminal tail[6] exposed to thecytoplasm.[8] The extracytoplasmic region contains a hinge-like structure which can formdisulphide bridges homologous to those observed in humanimmunoglobulin A.[8] Other characteristics of the structure of the LAMP-1 glycoproteins include:

Function

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LAMP1 andLAMP2 glycoproteins comprise 50% of all lysosomal membrane proteins,[6] and are thought to be responsible in part for maintaining lysosomal integrity, pH andcatabolism.[6][11] The expression of LAMP1 and LAMP2 glycoproteins are linked, as deficiencies inLAMP1 gene will lead to increased expression of LAMP2 glycoproteins.[11] The two are therefore thought to share similar functionsin vivo.[6] However, this makes the determining the precise function of LAMP1 difficult, because while theLAMP1 deficientphenotype is little different than the wild type due toLAMP2 up regulation,[6][11] theLAMP1/LAMP2 double deficient phenotype leads toembryonic lethality.[11]

Although the LAMP1 glycoproteins primarily reside across lysosomal membranes, in certain cases they can be expressed across the plasma membrane of the cell.[11] Expression of LAMP1 at the cell surface can occur due to lysosomalfusion with the cell membrane.[12] Cell surface expression of LAMP1 can serve as a ligand forselectins[13][14] and help mediate cell-cell adhesion.[15] Accordingly, cell surface expression of LAMP1 is seen in cells with migratory or invasive functions, such ascytotoxic T cells,platelets andmacrophages.[16] Cell surface expression of LAMP1 and LAMP2 is also often seen incancer cells,[16][17] particularly cancers with high metastatic potential, such as colon carcinoma and melanoma,[16] and has been shown to correlate with their metastatic potential.[11]

Role in cancer

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LAMP1 expression on the surface of tumor cells has been observed for a number of different cancer types, particularly in highly metastatic cancers such aspancreatic cancer,[18][19]colon cancer[16][17] andmelanoma.[16][17] The structure of LAMP1 correlates withdifferentiation[8][20] and metastatic potential[11] of tumor cells as it is thought to help mediate cell-cell adhesion[17] andmigration.[15][18] Indeed, the adhesion of some cancer cells to theextracellular matrix is mediated by interactions between LAMP1 and LAMP2 andE-selectin andgalectins, with the LAMPs serving as ligands for the cell-adhesion molecules.[17]

Cell membrane expression of LAMP-1 observed in the following cancer types:

See also

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References

[edit]
  1. ^abcGRCh38: Ensembl release 89: ENSG00000185896Ensembl, May 2017
  2. ^abcGRCm38: Ensembl release 89: ENSMUSG00000031447Ensembl, May 2017
  3. ^"Human PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^"Mouse PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^ab"LAMP1 lysosomal-associated membrane protein 1".Entrez Gene.
  6. ^abcdefEskelinen EL (2006). "Roles of LAMP-1 and LAMP-2 in lysosome biogenesis and autophagy".Molecular Aspects of Medicine.27 (5–6):495–502.doi:10.1016/j.mam.2006.08.005.PMID 16973206.
  7. ^"LAMP1".The Human Protein Atlas.
  8. ^abcdeCarlsson SR, Fukuda M (December 1989)."Structure of human lysosomal membrane glycoprotein 1. Assignment of disulfide bonds and visualization of its domain arrangement".The Journal of Biological Chemistry.264 (34):20526–20531.doi:10.1016/S0021-9258(19)47094-4.PMID 2584229.
  9. ^"LAMP1 - lysosomal-associated membrane protein1".Wikigenes.
  10. ^abcCarlsson SR, Roth J, Piller F, Fukuda M (December 1988)."Isolation and characterization of human lysosomal membrane glycoproteins, h-lamp-1 and h-lamp-2. Major sialoglycoproteins carrying polylactosaminoglycan".The Journal of Biological Chemistry.263 (35):18911–18919.doi:10.1016/S0021-9258(18)37369-1.PMID 3143719.
  11. ^abcdefghAndrejewski N, Punnonen EL, Guhde G, Tanaka Y, Lüllmann-Rauch R, Hartmann D, et al. (April 1999)."Normal lysosomal morphology and function in LAMP-1-deficient mice".The Journal of Biological Chemistry.274 (18):12692–12701.doi:10.1074/jbc.274.18.12692.PMID 10212251.
  12. ^Kima PE, Burleigh B, Andrews NW (December 2000)."Surface-targeted lysosomal membrane glycoprotein-1 (Lamp-1) enhances lysosome exocytosis and cell invasion by Trypanosoma cruzi".Cellular Microbiology.2 (6):477–486.doi:10.1046/j.1462-5822.2000.00071.x.PMID 11207602.S2CID 19192092.
  13. ^Laferte S, Dennis JW (April 1989)."Purification of two glycoproteins expressing beta 1-6 branched Asn-linked oligosaccharides from metastatic tumour cells".The Biochemical Journal.259 (2):569–576.doi:10.1042/bj2590569.PMC 1138546.PMID 2719668.
  14. ^Sawada R, Jardine KA, Fukuda M (April 1993)."The genes of major lysosomal membrane glycoproteins, lamp-1 and lamp-2. 5'-flanking sequence of lamp-2 gene and comparison of exon organization in two genes".The Journal of Biological Chemistry.268 (12):9014–9022.doi:10.1016/S0021-9258(18)52972-0.PMID 8517882.
  15. ^abAcevedo-Schermerhorn C, Gray-Bablin J, Gama R, McCormick PJ (November 1997). "t-complex-associated embryonic surface antigen homologous to mLAMP-1. II. Expression and distribution analyses".Experimental Cell Research.236 (2):510–518.doi:10.1006/excr.1997.3752.PMID 9367636.
  16. ^abcdeAgarwal AK, Srinivasan N, Godbole R, More SK, Budnar S, Gude RP, et al. (September 2015)."Role of tumor cell surface lysosome-associated membrane protein-1 (LAMP1) and its associated carbohydrates in lung metastasis".Journal of Cancer Research and Clinical Oncology.141 (9):1563–1574.doi:10.1007/s00432-015-1917-2.PMC 11823972.PMID 25614122.S2CID 9133450.
  17. ^abcdefghSarafian V, Jadot M, Foidart JM, Letesson JJ, Van den Brûle F, Castronovo V, et al. (January 1998)."Expression of Lamp-1 and Lamp-2 and their interactions with galectin-3 in human tumor cells".International Journal of Cancer.75 (1):105–111.doi:10.1002/(sici)1097-0215(19980105)75:1<105::aid-ijc16>3.0.co;2-f.PMID 9426697.
  18. ^abcJensen SS, Aaberg-Jessen C, Christensen KG, Kristensen B (2013)."Expression of the lysosomal-associated membrane protein-1 (LAMP-1) in astrocytomas".International Journal of Clinical and Experimental Pathology.6 (7):1294–1305.PMC 3693194.PMID 23826410.
  19. ^abKünzli BM, Berberat PO, Zhu ZW, Martignoni M, Kleeff J, Tempia-Caliera AA, et al. (January 2002). "Influences of the lysosomal associated membrane proteins (Lamp-1, Lamp-2) and Mac-2 binding protein (Mac-2-BP) on the prognosis of pancreatic carcinoma".Cancer.94 (1):228–239.doi:10.1002/cncr.10162.PMID 11815981.S2CID 12702437.
  20. ^Lee N, Wang WC, Fukuda M (November 1990)."Granulocytic differentiation of HL-60 cells is associated with increase of poly-N-acetyllactosamine in Asn-linked oligosaccharides attached to human lysosomal membrane glycoproteins".The Journal of Biological Chemistry.265 (33):20476–20487.doi:10.1016/S0021-9258(17)30529-X.PMID 2243101.

Further reading

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External links

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This article incorporates text from theUnited States National Library of Medicine, which is in thepublic domain.

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Enzymes
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