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KCNK9

From Wikipedia, the free encyclopedia
Protein-coding gene in the species Homo sapiens

KCNK9
Available structures
PDBOrtholog search:PDBeRCSB
List of PDB id codes

3P1N,3P1O,3P1P,3P1Q,3P1R,3P1S,3SMK,3SML,3SMM,3SMN,3SMO,3SPR,3UX0,4FR3,3SP5

Identifiers
AliasesKCNK9, K2p9.1, KT3.2, TASK-3, TASK3, potassium two pore domain channel subfamily K member 9, BIBARS, TASK32
External IDsOMIM:605874;MGI:3521816;HomoloGene:56758;GeneCards:KCNK9;OMA:KCNK9 - orthologs
Gene location (Human)
Chromosome 8 (human)
Chr.Chromosome 8 (human)[1]
Chromosome 8 (human)
Genomic location for KCNK9
Genomic location for KCNK9
Band8q24.3Start139,600,838bp[1]
End139,704,109bp[1]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • cerebellar hemisphere

  • right hemisphere of cerebellum

  • cerebellar vermis

  • right frontal lobe

  • secondary oocyte

  • Brodmann area 9

  • prefrontal cortex

  • primary visual cortex

  • Brodmann area 23

  • hypothalamus
    n/a
More reference expression data
BioGPS
More reference expression data
Gene ontology
Molecular function
Cellular component
Biological process
Sources:Amigo /QuickGO
Orthologs
SpeciesHumanMouse
Entrez

51305

223604

Ensembl

ENSG00000169427

n/a

UniProt

Q9NPC2

Q3LS21

RefSeq (mRNA)

NM_001282534

NM_001033876

RefSeq (protein)

NP_001269463

NP_001029048

Location (UCSC)Chr 8: 139.6 – 139.7 Mbn/a
PubMed search[2][3]
Wikidata
View/Edit HumanView/Edit Mouse

Potassium channel subfamily K member 9 is aprotein that in humans is encoded by theKCNK9gene.[4][5][6]

This gene encodes K2P9.1, one of the members of the superfamily of potassium channel proteins containing two pore-forming P domains. This open channel is highly expressed in the cerebellum. It is inhibited by extracellular acidification andarachidonic acid, and strongly inhibited by phorbol 12-myristate 13-acetate.[6][7] Phorbol 12-myristate 13-acetate is also known as12-O-tetradecanoylphorbol-13-acetate (TPA). TASK channels are additionally inhibited by hormones and transmitters that signal through GqPCRs. The resulting cellular depolarization is thought to regulate processes such as motor control andaldosterone secretion. Despite early controversy about the exact mechanism underlying this inhibition, the current view is thatDiacyl-glycerol, produced by the breakdown ofPhosphatidylinositol-4,5-bis-phosphate byPhospholipase Cβ causes channel closure.[8]

Expression

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The KCNK9 gene is expressed as an ion channel more commonly known as TASK 3. This channel has a varied pattern of expression. TASK 3 is coexpressed with TASK 1 (KCNK3) in the cerebellar granule cells, locus coeruleus, motor neurons, pontine nuclei, some cells in the neocortex, habenula, olfactory bulb granule cells, and cells in the external plexiform layer of the olfactory bulb.[9] TASK-3 channels are also expressed in the hippocampus; both on pyramidal cells and interneurons.[10] It is thought that these channels may form heterodimers where their expressions co-localise.[11][12]

Function

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Mice in which the TASK-3 gene has been deleted have reduced sensitivity to inhalation anaesthetics, exaggerated nocturnal activity and cognitive deficits as well as significantly increased appetite and weight gain.[13][14] A role for TASK-3 channels in neuronal network oscillations has also been described: TASK-3 knockout mice lack the atropine-sensitive halothane-induced theta oscillation (4–7 Hz) from the hippocampus and are unable to maintain theta oscillations during rapid eye movement (REM) sleep.[14]

Interactive pathway map

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Click on genes, proteins and metabolites below to link to respective articles.[§ 1]

  1. ^The interactive pathway map can be edited at WikiPathways:"NicotineDopaminergic_WP1602".

See also

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References

[edit]
  1. ^abcGRCh38: Ensembl release 89: ENSG00000169427Ensembl, May 2017
  2. ^"Human PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  3. ^"Mouse PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^Kim Y, Bang H, Kim D (May 2000)."TASK-3, a new member of the tandem pore K(+) channel family".Journal of Biological Chemistry.275 (13):9340–9347.doi:10.1074/jbc.275.13.9340.PMID 10734076.
  5. ^Goldstein SA, Bayliss DA, Kim D, Lesage F, Plant LD, Rajan S (Dec 2005)."International Union of Pharmacology. LV. Nomenclature and molecular relationships of two-P potassium channels".Pharmacological Reviews.57 (4):527–540.doi:10.1124/pr.57.4.12.PMID 16382106.S2CID 7356601.
  6. ^ab"Entrez Gene: KCNK9 potassium channel, subfamily K, member 9".
  7. ^"UniProtKB - Q9NPC2 (KCNK9_HUMAN)".Uniprot. Retrieved2019-05-29.
  8. ^Wilke BU, Lindner M, Greifenberg L, Albus A, Kronimus Y, Bunemann M, et al. (2014-11-25)."Diacylglycerol mediates regulation of TASK potassium channels by Gq-coupled receptors".Nature Communications.5 (1): 5540.Bibcode:2014NatCo...5.5540W.doi:10.1038/ncomms6540.ISSN 2041-1723.PMID 25420509.
  9. ^Bayliss DA, Sirois JE, Talley EM (June 2003). "The TASK family: two-pore domain background K+ channels".Molecular Interventions.3 (4):205–219.doi:10.1124/mi.3.4.205.PMID 14993448.
  10. ^Torborg CL, Berg AP, Jeffries BW, Bayliss DA, McBain CJ (Jul 12, 2006)."TASK-like conductances are present within hippocampal CA1 stratum oriens interneuron subpopulations".The Journal of Neuroscience.26 (28):7362–7367.doi:10.1523/jneurosci.1257-06.2006.PMC 6674194.PMID 16837582.
  11. ^Berg AP, Talley EM, Manger JP, Bayliss DA (Jul 28, 2004)."Motoneurons express heteromeric TWIK-related acid-sensitive K+ (TASK) channels containing TASK-1 (KCNK3) and TASK-3 (KCNK9) subunits".The Journal of Neuroscience.24 (30):6693–6702.doi:10.1523/jneurosci.1408-04.2004.PMC 6729708.PMID 15282272.
  12. ^Kang D, Han J, Talley EM, Bayliss DA, Kim D (Jan 1, 2004)."Functional expression of TASK-1/TASK-3 heteromers in cerebellar granule cells".The Journal of Physiology.554 (Pt 1):64–77.doi:10.1113/jphysiol.2003.054387.PMC 1664745.PMID 14678492.
  13. ^Linden AM, Aller MI, Leppä E, Rosenberg PH, Wisden W, Korpi ER (October 2008). "K+ channel TASK-1 knockout mice show enhanced sensitivities to ataxic and hypnotic effects of GABA(A) receptor ligands".The Journal of Pharmacology and Experimental Therapeutics.327 (1):277–286.doi:10.1124/jpet.108.142083.PMID 18660435.S2CID 31086459.
  14. ^abPang DS, Robledo CJ, Carr DR, Gent TC, Vyssotski AL, Caley A, et al. (Oct 13, 2009)."An unexpected role for TASK-3 potassium channels in network oscillations with implications for sleep mechanisms and anesthetic action"(PDF).Proceedings of the National Academy of Sciences of the United States of America.106 (41):17546–17551.Bibcode:2009PNAS..10617546P.doi:10.1073/pnas.0907228106.PMC 2751655.PMID 19805135.[permanent dead link]

Further reading

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External links

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This article incorporates text from theUnited States National Library of Medicine, which is in thepublic domain.

Ligand-gated
Voltage-gated
Constitutively active
Proton-gated
Voltage-gated
Calcium-activated
Inward-rectifier
Tandem pore domain
Voltage-gated
Miscellaneous
Cl:Chloride channel
H+:Proton channel
M+:CNG cation channel
M+:TRP cation channel
H2O (+solutes):Porin
Cytoplasm:Gap junction
By gating mechanism
Ion channel class
see alsodisorders
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