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ING4

From Wikipedia, the free encyclopedia
Protein-coding gene in the species Homo sapiens
ING4
Available structures
PDBOrtholog search:PDBeRCSB
List of PDB id codes

2K1J,2M1R,2PNX,2VNF,4AFL

Identifiers
AliasesING4, my036, p29inhibitor of growth family member 4
External IDsOMIM:608524;MGI:107307;HomoloGene:22952;GeneCards:ING4;OMA:ING4 - orthologs
Gene location (Human)
Chromosome 12 (human)
Chr.Chromosome 12 (human)[1]
Chromosome 12 (human)
Genomic location for ING4
Genomic location for ING4
Band12p13.31Start6,650,301bp[1]
End6,663,142bp[1]
Gene location (Mouse)
Chromosome 6 (mouse)
Chr.Chromosome 6 (mouse)[2]
Chromosome 6 (mouse)
Genomic location for ING4
Genomic location for ING4
Band6 F2|6 59.17 cMStart125,016,723bp[2]
End125,026,228bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • ganglionic eminence

  • monocyte

  • ventricular zone

  • right hemisphere of cerebellum

  • right uterine tube

  • granulocyte

  • right lobe of thyroid gland

  • left lobe of thyroid gland

  • C1 segment

  • muscle layer of sigmoid colon
Top expressed in
  • granulocyte

  • ventricular zone

  • lip

  • neural layer of retina

  • thin ascending limb of loop of Henle

  • right kidney

  • spermatocyte

  • muscle of thigh

  • morula

  • dentate gyrus of hippocampal formation granule cell
More reference expression data
BioGPS


More reference expression data
Gene ontology
Molecular function
Cellular component
Biological process
Sources:Amigo /QuickGO
Orthologs
SpeciesHumanMouse
Entrez

51147

28019

Ensembl

ENSG00000111653

ENSMUSG00000030330

UniProt

Q9UNL4

Q8C0D7

RefSeq (mRNA)
NM_001127582
NM_001127583
NM_001127584
NM_001127585
NM_001127586

NM_016162
NM_198287

NM_133345
NM_144510
NM_001368695

RefSeq (protein)
NP_001121054
NP_001121055
NP_001121056
NP_001121057
NP_001121058

NP_057246

NP_579923
NP_001355624

Location (UCSC)Chr 12: 6.65 – 6.66 MbChr 6: 125.02 – 125.03 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

Inhibitor of growth protein 4 is aprotein that in humans is encoded by theING4gene.[5][6]

Function

[edit]

The protein encoded by this gene is similar to ING1, a tumor suppressor protein that can interact with TP53, inhibit cell growth, and induce apoptosis. This protein contains a PHD-finger, which is a common motif in proteins involved in chromatin remodeling. This protein can bind TP53 and EP300/p300, a component of the histone acetyl transferase complex, suggesting its involvement in the TP53-dependent regulatory pathway. Alternatively spliced transcript variants have been observed, but the biological validity of them has not been determined.[6]

Interactions

[edit]

ING4 has been shown tointeract withEP300,[5]RELA[7] andP53.[5][8]

References

[edit]
  1. ^abcGRCh38: Ensembl release 89: ENSG00000111653Ensembl, May 2017
  2. ^abcGRCm38: Ensembl release 89: ENSMUSG00000030330Ensembl, May 2017
  3. ^"Human PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^"Mouse PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^abcShiseki M, Nagashima M, Pedeux RM, Kitahama-Shiseki M, Miura K, Okamura S, Onogi H, Higashimoto Y, Appella E, Yokota J, Harris CC (May 2003). "p29ING4 and p28ING5 bind to p53 and p300, and enhance p53 activity".Cancer Research.63 (10):2373–8.PMID 12750254.
  6. ^ab"Entrez Gene: ING4 inhibitor of growth family, member 4".
  7. ^Garkavtsev I, Kozin SV, Chernova O, Xu L, Winkler F, Brown E, Barnett GH, Jain RK (March 2004). "The candidate tumour suppressor protein ING4 regulates brain tumour growth and angiogenesis".Nature.428 (6980):328–32.Bibcode:2004Natur.428..328G.doi:10.1038/nature02329.PMID 15029197.S2CID 4427531.
  8. ^Tsai KW, Tseng HC, Lin WC (October 2008). "Two wobble-splicing events affect ING4 protein subnuclear localization and degradation".Experimental Cell Research.314 (17):3130–41.doi:10.1016/j.yexcr.2008.08.002.PMID 18775696.

Further reading

[edit]
PDB gallery
  • 1wen: Solution structure of PHD domain in ING1-like protein BAC25079
    1wen: Solution structure of PHD domain in ING1-like protein BAC25079
  • 1weu: Solution structure of PHD domain in ING1-like protein BAC25009
    1weu: Solution structure of PHD domain in ING1-like protein BAC25009
  • 2jmq:
    2jmq:

External links

[edit]

This article incorporates text from theUnited States National Library of Medicine, which is in thepublic domain.

(1) Basic domains
(1.1) Basicleucine zipper (bZIP)
(1.2) Basic helix-loop-helix (bHLH)
Group A
Group B
Group C
bHLH-PAS
Group D
Group E
Group F
bHLH-COE
(1.3)bHLH-ZIP
(1.4) NF-1
(1.5) RF-X
(1.6) Basic helix-span-helix (bHSH)
(2)Zinc finger DNA-binding domains
(2.1)Nuclear receptor(Cys4)
subfamily 1
subfamily 2
subfamily 3
subfamily 4
subfamily 5
subfamily 6
subfamily 0
(2.2) Other Cys4
(2.3) Cys2His2
(2.4) Cys6
(2.5) Alternating composition
(2.6) WRKY
(3.1)Homeodomain
Antennapedia
ANTP class
protoHOX
Hox-like
metaHOX
NK-like
other
(3.2) Paired box
(3.3)Fork head /winged helix
(3.4)Heat shock factors
(3.5) Tryptophan clusters
(3.6) TEA domain
  • transcriptional enhancer factor
(4)β-Scaffold factors with minor groove contacts
(4.1)Rel homology region
(4.2)STAT
(4.3) p53-like
(4.4)MADS box
(4.6)TATA-binding proteins
(4.7)High-mobility group
(4.9) Grainyhead
(4.10) Cold-shock domain
(4.11) Runt
(0) Other transcription factors
(0.2) HMGI(Y)
(0.3)Pocket domain
(0.5)AP-2/EREBP-related factors
(0.6) Miscellaneous
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