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Hydrolase

From Wikipedia, the free encyclopedia
Class of enzymes which use water to break a chemical bond
Not to be confused withhydroxylase.

Inbiochemistry,hydrolases constitute a class ofenzymes that commonly function as biochemicalcatalysts that use water tobreak achemical bond:

AB+H2O hydrolase AOH+BH{\displaystyle {\ce {A-B + H2O}}\quad {\xrightarrow[{\text{ hydrolase }}]{}}\quad {\ce {A-OH + B-H}}}

This typically results in dividing a larger molecule into smaller molecules. Some common examples of hydrolase enzymes areesterases includinglipases,phosphatases,glycosidases,peptidases, andnucleosidases.

Esterases cleave ester bonds inlipids and phosphatases cleavephosphate groups off molecules. An example of crucial esterase isacetylcholine esterase, which assists in transforming the neuron impulse into theacetate group after the hydrolase breaks theacetylcholine intocholine andacetic acid.[1] Acetic acid is an important metabolite in the body and a critical intermediate for other reactions such asglycolysis. Lipases hydrolyzeglycerides. Glycosidases cleave sugar molecules off carbohydrates and peptidases hydrolyzepeptide bonds. Nucleosidases hydrolyze the bonds ofnucleotides.[2]

Hydrolase enzymes are important for the body because they have degradative properties. In lipids, lipases contribute to the breakdown of fats and lipoproteins and other larger molecules into smaller molecules like fatty acids andglycerol. Fatty acids and other small molecules are used for synthesis and as a source of energy.[1]

Nomenclature

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Systematic names of hydrolases are formed as "substrate hydrolase." However, common names are typically in the form "substrate base". For example, anuclease is a hydrolase that cleavesnucleic acids.

Classification

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Hydrolases are classified asEC 3 in theEC number classification of enzymes. Hydrolases can be further classified into several subclasses, based upon the bonds they act upon:

Clinical considerations

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Hydrolase secreted byLactobacillus jensenii in thehuman gut stimulates theliver to secretebile salts that aids in the digestion of food.[3]

Membrane-associated hydrolases

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Many hydrolases, and especiallyproteases associate withbiological membranes asperipheral membrane proteins or anchored through a singletransmembrane helix.[4] Some others are multi-spantransmembrane proteins, for examplerhomboid protease.

Etymology and pronunciation

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The wordhydrolase (/ˈhdrls,-lz/) suffixes thecombining form of-ase to thehydrol syllables ofhydrolysis.

See also

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References

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  1. ^ab"Hydrolase - Chemistry Encyclopedia - water, examples, molecule".www.chemistryexplained.com. Retrieved2018-04-29.
  2. ^"hydrolase | class of enzymes | Britannica".www.britannica.com. 9 April 2018. Retrieved29 April 2017.
  3. ^Prince, Amanda L.; Antony, Kathleen M.; Chu, Derrick M.; Aagaard, Kjersti M. (2014)."The microbiome, parturition, and timing of birth: more questions than answers".Journal of Reproductive Immunology.104–105:12–19.doi:10.1016/j.jri.2014.03.006.ISSN 0165-0378.PMC 4157949.PMID 24793619.
  4. ^"Superfamilies of single-pass transmembrane hydrolases".membranome.org. July 2018.Archived from the original on 8 March 2022. Retrieved23 July 2018.
Activity
Regulation
Classification
Kinetics
Types
3.1.1:Carboxylic
ester hydrolases
3.1.2:Thioesterase
3.1.3:Phosphatase
3.1.4:
Phosphodiesterase
3.1.6:Sulfatase
Nuclease (includes
deoxyribonuclease
andribonuclease)
3.1.11-16:
Exonuclease
Exodeoxyribonuclease
Exoribonuclease
3.1.21-31:
Endonuclease
Endodeoxyribonuclease
Endoribonuclease
either deoxy- or ribo-    
Hydrolase: sugar hydrolases (EC 3.2)
3.2.1:Glycoside hydrolases
Disaccharidase
Glucosidases
Other
3.2.2: Hydrolysing
N-Glycosyl compounds
Hydrolases: ether bond (EC 3.3)
3.3.1
3.3.2
3.4.11-19:Exopeptidase
3.4.11
3.4.13
3.4.14
3.4.15
3.4.16
3.4.17
Other/ungrouped
3.4.21-25:Endopeptidase
3.4.99: Unknown
Hydrolases: carbon-nitrogen non-peptide (EC 3.5)
3.5.1: Linear amides /
Amidohydrolases
3.5.2: Cyclic amides/
Amidohydrolases
3.5.3: Linear amidines/
Ureohydrolases
3.5.4: Cyclic amidines/
Aminohydrolases
3.5.5: Nitriles/
Aminohydrolases
3.5.99: Other
3.6.1
3.6.2
3.6.3-4:ATPase
3.6.3
Cu++ (3.6.3.4)
Ca+ (3.6.3.8)
Na+/K+ (3.6.3.9)
H+/K+ (3.6.3.10)
OtherP-type ATPase
3.6.4
3.6.5:GTPase
3.6.5.1:Heterotrimeric G protein
3.6.5.2:Small GTPase >Ras superfamily
3.6.5.3:Protein-synthesizing GTPase
3.6.5.5-6:Polymerization motors
Hydrolases: carbon-carbon (EC 3.7)
3.7.1
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