Movatterモバイル変換


[0]ホーム

URL:


Jump to content
WikipediaThe Free Encyclopedia
Search

Heparin cofactor II

From Wikipedia, the free encyclopedia
Protein-coding gene in the species Homo sapiens
SERPIND1
Available structures
PDBOrtholog search:PDBeRCSB
List of PDB id codes

1JMO,1JMJ,2NAT

Identifiers
AliasesSERPIND1, D22S673, HC2, HCF2, HCII, HLS2, LS2, THPH10, serpin family D member 1
External IDsOMIM:142360;MGI:96051;HomoloGene:36018;GeneCards:SERPIND1;OMA:SERPIND1 - orthologs
Gene location (Human)
Chromosome 22 (human)
Chr.Chromosome 22 (human)[1]
Chromosome 22 (human)
Genomic location for SERPIND1
Genomic location for SERPIND1
Band22q11.21Start20,774,113bp[1]
End20,787,720bp[1]
Gene location (Mouse)
Chromosome 16 (mouse)
Chr.Chromosome 16 (mouse)[2]
Chromosome 16 (mouse)
Genomic location for SERPIND1
Genomic location for SERPIND1
Band16 A3|16 10.74 cMStart17,149,235bp[2]
End17,161,439bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • liver

  • right lobe of liver

  • Epithelium of choroid plexus

  • testicle

  • trigeminal ganglion

  • nucleus accumbens

  • islet of Langerhans

  • right auricle of heart

  • left ovary

  • canal of the cervix
Top expressed in
  • liver

  • left lobe of liver

  • fetal liver hematopoietic progenitor cell

  • optic nerve

  • sciatic nerve

  • gallbladder

  • human fetus

  • yolk sac

  • lens

  • sexually immature organism
More reference expression data
BioGPS
More reference expression data
Gene ontology
Molecular function
Cellular component
Biological process
Sources:Amigo /QuickGO
Orthologs
SpeciesHumanMouse
Entrez

3053

15160

Ensembl

ENSG00000099937

ENSMUSG00000022766

UniProt

P05546

P49182

RefSeq (mRNA)

NM_000185

NM_008223
NM_001331047

RefSeq (protein)

NP_000176

NP_001317976
NP_032249

Location (UCSC)Chr 22: 20.77 – 20.79 MbChr 16: 17.15 – 17.16 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

Heparin cofactor II (HCII), aprotein encoded by theSERPIND1gene, is acoagulation factor that inhibits IIa, and is a cofactor forheparin anddermatan sulfate ("minor antithrombin").[5]

The product encoded by this gene is aserine protease inhibitor which rapidly inhibitsthrombin in the presence of dermatan sulfate or heparin. The gene contains fiveexons and fourintrons. This protein shareshomology withantithrombin III and other members of thealpha-1 antitrypsinsuperfamily.Mutations in this gene are associated with heparin cofactor II deficiency.[5] Heparin cofactor II deficiency can lead to increased thrombin generation and ahypercoagulable state.

Apurification experiment of heparin cofactor II was performed in 1981, in which it was discovered that the purified version of the protein consists of a singlepolypeptide chain.[6] Further experimentation demonstrated that whetherβ-Mercaptoethanol is present does not affect HCII's activity ingel electrophoresis. β-Mercaptoethanol is typically used for the reduction ofdisulfide bonds within a molecule, but the gel electrophoresis revealed that HCII does not have any of these bonds. The structure is similar to antithrombin III (ATIII), which was known to effectively inhibit thrombin as well ascoagulation factor Xa.[6] This experiment suggested that HCII has strong thrombin inhibition, yet weak inhibition of coagulation factor Xa.

Heparin cofactor II may play a role in theimmune response, as it has been associated withleukocyte-mediatedprotein degradation, which releasescytokines in the inflammatory response withneutrophils andmonocytes.[7] Its role has been questioned because although it is a thrombininhibitor, an absence of HCII does not result in significantly higher levels ofthrombosis.[7] This does not negate the results of the 1981 study, but novel discoveries create more questions of the biological mechanism and function of the protein. However, this cofactor shows stronger capability in inhibiting thrombin in pregnant women, protecting them from thrombosis. Pregnant women have shown increased levels of heparin cofactor II as well as dermatan sulfate, which is apolysaccharide that is expected to be involved in wound repair, coagulation, and overall maintenance throughout the body. Pregnant women who had thrombosis are likely to also have low levels of heparin cofactor II, but whether this is a causation is still unknown.[8]

References

[edit]
  1. ^abcGRCh38: Ensembl release 89: ENSG00000099937Ensembl, May 2017
  2. ^abcGRCm38: Ensembl release 89: ENSMUSG00000022766Ensembl, May 2017
  3. ^"Human PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^"Mouse PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^ab"Entrez Gene: SERPIND1 serpin peptidase inhibitor, clade D (heparin cofactor), member 1".
  6. ^abTollefsen, D M; Majerus, D W; Blank, M K (March 1982)."Heparin cofactor II. Purification and properties of a heparin-dependent inhibitor of thrombin in human plasma".Journal of Biological Chemistry.257 (5):2162–2169.doi:10.1016/s0021-9258(18)34900-7.ISSN 0021-9258.PMID 6895893.
  7. ^abBrummel-Ziedins, Kathleen; Mann, Kenneth G. (2018-01-01)."Molecular Basis of Blood Coagulation".Hematology: 1885–1905.e8.doi:10.1016/B978-0-323-35762-3.00126-8.ISBN 9780323357623.
  8. ^Huntington, James A. (2005-01-01)."Heparin Activation of Serpins".Chemistry and Biology of Heparin and Heparan Sulfate:367–398.doi:10.1016/B978-008044859-6/50014-9.ISBN 9780080448596.

Further reading

[edit]
PDB gallery
  • 1jmj: Crystal Structure of Native Heparin Cofactor II
    1jmj: Crystal Structure of Native Heparin Cofactor II
  • 1jmo: Crystal Structure of the Heparin Cofactor II-S195A Thrombin Complex
    1jmo: Crystal Structure of the Heparin Cofactor II-S195A Thrombin Complex

External links

[edit]
inhibitory
Cross class inhibitory
noninhibitory
Serumglobulins
Alpha globulins
serpins:
carrier proteins:
other:
Beta globulins
carrier proteins:
other:
Gamma globulin
Other
Other globulins
Albumins
Egg white
Serum albumin
Other
Retrieved from "https://en.wikipedia.org/w/index.php?title=Heparin_cofactor_II&oldid=1317961284"
Categories:
Hidden categories:

[8]ページ先頭

©2009-2026 Movatter.jp