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Hanes–Woolf plot

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Graph of enzyme kinetics
Hanes plot of a/v against a for Michaelis–Menten kinetics

Inbiochemistry, aHanes–Woolf plot,Hanes plot, orplot ofa/v{\displaystyle a/v} againsta{\displaystyle a} is a graphical representation ofenzyme kinetics in which the ratio of the initial substrate concentrationa{\displaystyle a} to thereaction velocityv{\displaystyle v} is plotted againsta{\displaystyle a}. It is based on the rearrangement of theMichaelis–Menten equation shown below:

av=aV+KmV{\displaystyle {a \over v}={a \over V}+{K_{\mathrm {m} } \over V}}

whereKm{\displaystyle K_{\mathrm {m} }} is theMichaelis constant andV{\displaystyle V} is the limiting rate.[1]

J. B. S. Haldane stated, reiterating what he and K. G. Stern had written in their book,[2] that this rearrangement was due toBarnet Woolf.[3] However, it was just one of three transformations introduced by Woolf. It was first published by C. S. Hanes, though he did not use it as a plot.[4] Hanes noted that the use of linear regression to determine kinetic parameters from this type of linear transformation generates the best fit between observed and calculated values of1/v{\displaystyle 1/v}, rather thanv{\displaystyle v}.[4]: 1415 

Starting from the Michaelis–Menten equation:

v=VaKm+a{\displaystyle v={{Va} \over {K_{\mathrm {m} }+a}}}

we can take reciprocals of both sides of the equation to obtain the equation underlying theLineweaver–Burk plot:

1v=1V+KmV1a{\displaystyle {1 \over v}={1 \over V}+{K_{\mathrm {m} } \over V}\cdot {1 \over a}}

which can be multiplied on both sides bya{\displaystyle {a}} to give

av=1Va+KmV{\displaystyle {a \over v}={1 \over V}\cdot a+{K_{\mathrm {m} } \over V}}

Thus in the absence of experimental error data a plot ofa/v{\displaystyle {a/v}} againsta{\displaystyle {a}} yields a straight line of slope1/V{\displaystyle 1/V}, an intercept on the ordinate ofKm/V{\displaystyle {K_{\mathrm {m} }/V}}and an intercept on the abscissa ofKm{\displaystyle -K_{\mathrm {m} }}.

Like other techniques that linearize the Michaelis–Menten equation, the Hanes–Woolf plot was used historically for rapid determination of the kinetic parametersKm{\displaystyle K_{\mathrm {m} }},V{\displaystyle V} andKm/V{\displaystyle K_{\mathrm {m} }/V}, but it has been largely superseded bynonlinear regression methods that are significantly more accurate and no longer computationally inaccessible. It remains useful, however, as a means to present data graphically.

See also

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References

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  1. ^The termmaximum rate is often used, but not recommended by the IUBMB; seeCornish-Bowden, A (2014)."Current IUBMB recommendations on enzyme nomenclature and kinetics".Persp. Sci.1 (1–6):74–87.Bibcode:2014PerSc...1...74C.doi:10.1016/j.pisc.2014.02.006.
  2. ^Haldane, John Burdon Sanderson; Stern, Kurt Günter (1932).Allgemeine Chemie der Enzyme. Wissenschaftliche Forschungsberichte, Naturwissenschaftliche Reihe, herausgegeben von Dr.Raphael Eduard Liesegang. Vol. 28. Dresden and Leipzig: Theodor Steinkopff. pp. 119–120.OCLC 964209806.
  3. ^Haldane, John Burdon Sanderson (1957)."Graphical methods in enzyme chemistry".Nature.179 (4564): 832.Bibcode:1957Natur.179R.832H.doi:10.1038/179832b0.S2CID 4162570.
  4. ^abHanes, Charles Samuel (1932)."Studies on plant amylases: The effect of starch concentration upon the velocity of hydrolysis by the amylase of germinated barley".Biochemical Journal.26 (5):1406–1421.doi:10.1042/bj0261406.PMC 1261052.PMID 16744959.
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