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HESX1

From Wikipedia, the free encyclopedia
Protein-coding gene in the species Homo sapiens
HESX1
Available structures
PDBOrtholog search:PDBeRCSB
List of PDB id codes

2K40

Identifiers
AliasesHESX1, ANF, CPHD5, RPX, HESX homeobox 1
External IDsOMIM:601802;MGI:96071;HomoloGene:20831;GeneCards:HESX1;OMA:HESX1 - orthologs
Gene location (Human)
Chromosome 3 (human)
Chr.Chromosome 3 (human)[1]
Chromosome 3 (human)
Genomic location for HESX1
Genomic location for HESX1
Band3p14.3Start57,197,838bp[1]
End57,227,606bp[1]
Gene location (Mouse)
Chromosome 14 (mouse)
Chr.Chromosome 14 (mouse)[2]
Chromosome 14 (mouse)
Genomic location for HESX1
Genomic location for HESX1
Band14|14 A3Start26,716,373bp[2]
End26,724,286bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • buccal mucosa cell

  • testicle

  • gonad

  • right testis

  • left testis

  • ventricular zone

  • C1 segment

  • right lobe of liver

  • right adrenal gland

  • right adrenal cortex
Top expressed in
  • blastocyst

  • Rathke's pouch

  • embryo

  • embryo

  • endoderm

  • morula

  • epiblast

  • definitive endoderm

  • yolk sac

  • Stomodeum
More reference expression data
BioGPS
n/a
Gene ontology
Molecular function
Cellular component
Biological process
Sources:Amigo /QuickGO
Orthologs
SpeciesHumanMouse
Entrez

8820

15209

Ensembl

ENSG00000163666

ENSMUSG00000040726

UniProt

Q9UBX0

Q61658

RefSeq (mRNA)

NM_003865
NM_001376058
NM_001376059
NM_001376060
NM_001376061

NM_010420

RefSeq (protein)

NP_003856
NP_001362987
NP_001362988
NP_001362989
NP_001362990

NP_034550

Location (UCSC)Chr 3: 57.2 – 57.23 MbChr 14: 26.72 – 26.72 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

Homeobox expressed in ES cells 1, also known ashomeobox protein ANF, is ahomeoboxprotein that in humans is encoded by theHESX1gene.[5]

Expression ofHEX1 and HESX1 marks theanterior visceral endoderm of the embryo. The AVE is an extra-embryonic tissue, key to the establishment of the anterior-posterior body axis.

Clinical significance

[edit]

Mutations in the HESX1 gene are associated with some cases ofsepto-optic dysplasia[6] orPickardt-Fahlbusch syndrome.[7]

References

[edit]
  1. ^abcGRCh38: Ensembl release 89: ENSG00000163666Ensembl, May 2017
  2. ^abcGRCm38: Ensembl release 89: ENSMUSG00000040726Ensembl, May 2017
  3. ^"Human PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^"Mouse PubMed Reference:".National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^"Entrez Gene: HESX homeobox 1".
  6. ^Dattani MT, Martinez-Barbera JP, Thomas PQ, et al. (1998). "Mutations in the homeobox gene HESX1/Hesx1 associated with septo-optic dysplasia in human and mouse".Nat. Genet.19 (2):125–33.doi:10.1038/477.PMID 9620767.S2CID 28880292.
  7. ^Reynaud R, Albarel F, Saveanu A, Kaffel N, Castinetti F, Lecomte P, Brauner R, Simonin G, Gaudart J, Carmona E, Enjalbert A, Barlier A, Brue T (January 2011)."Pituitary Stalk Interruption Syndrome in 83 patients: novel HESX1 mutation and severe hormonal prognosis in malformative forms".Eur J Endocrinol.164 (4):457–65.doi:10.1530/EJE-10-0892.PMID 21270112.

Further reading

[edit]

External links

[edit]
(1) Basic domains
(1.1) Basicleucine zipper (bZIP)
(1.2) Basic helix-loop-helix (bHLH)
Group A
Group B
Group C
bHLH-PAS
Group D
Group E
Group F
bHLH-COE
(1.3)bHLH-ZIP
(1.4) NF-1
(1.5) RF-X
(1.6) Basic helix-span-helix (bHSH)
(2)Zinc finger DNA-binding domains
(2.1)Nuclear receptor(Cys4)
subfamily 1
subfamily 2
subfamily 3
subfamily 4
subfamily 5
subfamily 6
subfamily 0
(2.2) Other Cys4
(2.3) Cys2His2
(2.4) Cys6
(2.5) Alternating composition
(2.6) WRKY
(3.1)Homeodomain
Antennapedia
ANTP class
protoHOX
Hox-like
metaHOX
NK-like
other
(3.2) Paired box
(3.3)Fork head /winged helix
(3.4)Heat shock factors
(3.5) Tryptophan clusters
(3.6) TEA domain
  • transcriptional enhancer factor
(4)β-Scaffold factors with minor groove contacts
(4.1)Rel homology region
(4.2)STAT
(4.3) p53-like
(4.4)MADS box
(4.6)TATA-binding proteins
(4.7)High-mobility group
(4.9) Grainyhead
(4.10) Cold-shock domain
(4.11) Runt
(0) Other transcription factors
(0.2) HMGI(Y)
(0.3)Pocket domain
(0.5)AP-2/EREBP-related factors
(0.6) Miscellaneous


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